Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6000 ATGACTGATGCCTTACTTGGTGTTGTGTTTGAGAACCTGACGTCTCTGGTTCAAAATGAATTTGCAACTCTATCTGGAATCAAGTCAAAGGCTCAAAAGCTATCAACCACCTTGGAACTGATTAAGGCTGTTCTTGAAGATGCCGAAAAGAAGCAATTAACAGACCGCTCTATTCAAATATGGCTGCAACAACTCAAAGATGCGGTGTATGTGCTTGATGATATCCTTGATGAATGTTCGATAAAATCCAGTCGACTTAGGGGATTATCCTCTTTCAAACCAAAGAACGTCATGTTTCGCCATTACATAGGCAGTAGGTTGAAAGAGATTGCAAGCAGACTCGGTCAAATTGCTGAAAGTAAGAACAAATTTCTTCTAAGAGAAGGTGTTACTGTTACGGAAAAATTACCAACTGAAGTGGCTGAATGGCGTCAAACCAGCTCCATTATTGCAGAACCAAAAGTGCTTGGACGAGAAGATGATAAAGAGAAGATTGTTGAGTTTCTTCTCACCCAAGCGAGAGACTCTGACTTTCTTTCCGTCTATCCCATTGTTGGTTTAGGTGGTGTTGGAAAAACGACTCTTGCTCAATTGGTCTACAACGATGATAGGGTGAGTCGCAATTTTAATACAAAAATTTGGGTTTGTGTTTCAGAGGTTTTCTCAGTCAAGAGGATTTTGTGTTCCATTATAGAATCCATGACAAAAGAGAAGTGTGATGCAATGGATTTAGATGTAATACAAAGAAATGTGCAAGAAATGCTGCAAGGTAAAAGATGTTTGTTGATTTTGGATGATGTGTGGAACACAAATCCAGAATTTGAATTAGGATTAAACCAAGAGAAATGGAATAAGTTGAAATCGGTGTTGTCTTGTGGATCCAAAGGTACTTCCGTTTTAGTGTCTACTCGTGATATGGATGTTGCATCAATCATGGGAACATGCCCAACCCGTCCTTTGTCGGTTCTCTCTGATAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGGACATGATAGACAAGAGCGTGCAGAGCTTGTGGCAATAGGCAAGGAGATAGTAAAAAAGTGTGGAGGATTGCCTCTTGCAGCTCAAGCATTGGGGTGTCTAATGCACTCAAGGGGTGAAGAAAAGGAATGGTTTGAAATTAAAGAGAGTGACCTTTGGGATTTACCGCATGAGAATTCTGTTTTGCCAGCTTTGAGGTTAAGCTACTTTCATTTATCGCCAACCTTAAAACAATGTTTCGCTTTTTGTGCTATATTTCCAAAAGATACAGAAATCATGAAGGAAGAATTGATTCATCTTTGGATGGCTAATGGATTTATTTCTTCTAGAAAAAATTTGGAGGTTGAAGATGTTGGCAACATGATTTGCAATGAATTGTGCACAAAATCTTTCTTTCAAGTCATCCATATAGATGATTATTCAAGAGACATTTCTTTCAAAATGCATGATCTCATCCATGATCTTGCTCAATCAGTAGGGGGGCAAGAATGTATGGTTTTAGAGAATGCATGTGTGACTAAATTGTCAAAAAGCACACATCATATTAGTTTCAACTCTTTGCGTTCGGTATCATCAGAAGAGGAATCCTTCACAGAAGTAGAATCGTTGCGAACATTGTATCAAATAGAATTTATTGGATCAAGCGATAGAAGTTTCTTACCAATAAAGCAAACTCTTCGGGTTTTAAGAACAAACACTTTAGAGTTATCATTACTCGGTAGTTTAATTCATTTGAGGTATTTGGAGCTTCACAATTTTGACATAGAAACCTTCCCCGACTCAATTTATAGCTTACAAAAATTGGAAATCTTGAAATTGAAAGATTTAACCAGACTGAGTTGTCTACCAAAACGCTTGTCTTGCTTACAAAAACTTAGACATTTAGTCATTAAAGATTGTCATCGGTTGTTTCGCATGTTTCCTCACATTGGAAAATTATCTTGCCTAAGAACATTAAATGTTTATATTATTAATTCAGAGAAAGGACATGGCTTAGATGAGTTACGTGATCTAAACTTAGGAGGAAAGCTAAAGATCAAAAACTTACAAAATGTCGGTAGTTTATCAGAAGCTCAAGAAGCCAATTTGATGGGTAAAAAAGACCTCAATGAATTATGCTTGTCATGGAAGTACAGTGATTCATCTGTCAAGACCCCTATTATTAGTGATGAGCAAGTAATTGAAGTGCTTCAACCTCATATGAATCTCAAGAGCTTGAAAATACATTTCTACAAAGGATTATGCTTGCCAAGTTGGATCGTAATTCTATGTAATTTAGTTACTCTTGTAGTGAAGGATTGCAAGCTTTGTGAACGGTTTTCTTCACTTGGTAAACTACCATCTCTAAAAAAACTCCAGTTATTCAATGTGTCTGTGAAATACTTGGATGATGATGAATTTCACAATGGTATGGAGGTGAGGGTTTTCCCATCTCTGGAGGTACTCAAATTAGAAATGCTACCAAACTTAGTAGGCTTGTATAAAGTGGAAAGAAAGGGGATGTTTCCTTGTCTTTCTATTTTAGAAACCAACTTTTGCCCTAAACTTGAACTTCCATGTCTTCCATCTGTTAAAGAACTGACAGTATTTGAATGTAATGATGATTTACTGAAGTCAATCTCTAGCTTGTATGGTCTTACCACCCTTACCCTTTATGAAGGTAGAGGAATAACATCCTTCCCAAAGGAGATGTTTGGTAACCTCACTTGTCTTCAAACTCTAAAAGTATCGAGTTTCCCAAATTTGAAGGAGTTACCAAATGAACCCTTTAACCTAGCTTTGGAGCATCTGAGTATTTCATTTTGCTATGAGCTTGAGTATTTACCAGAGAATATATGGGGAGGTCTGCTATCACTTCAATCTATGTCGATTTATCAATGTAACAGATTAAAATGTTTGCCAGACGGTATTAGGCACCTCACTGCACTTGATTGGTTGACTATTAGTGGATGCCCAACATTGACGGAGCGATGCAAGGAGGGAACAGGGGAAGACTGGGACAAGATAGCGCATATTCCAAATCTAAATGTTTGA 3045 0.3744 MTDALLGVVFENLTSLVQNEFATLSGIKSKAQKLSTTLELIKAVLEDAEKKQLTDRSIQIWLQQLKDAVYVLDDILDECSIKSSRLRGLSSFKPKNVMFRHYIGSRLKEIASRLGQIAESKNKFLLREGVTVTEKLPTEVAEWRQTSSIIAEPKVLGREDDKEKIVEFLLTQARDSDFLSVYPIVGLGGVGKTTLAQLVYNDDRVSRNFNTKIWVCVSEVFSVKRILCSIIESMTKEKCDAMDLDVIQRNVQEMLQGKRCLLILDDVWNTNPEFELGLNQEKWNKLKSVLSCGSKGTSVLVSTRDMDVASIMGTCPTRPLSVLSDNECWLLFKQYAFGHDRQERAELVAIGKEIVKKCGGLPLAAQALGCLMHSRGEEKEWFEIKESDLWDLPHENSVLPALRLSYFHLSPTLKQCFAFCAIFPKDTEIMKEELIHLWMANGFISSRKNLEVEDVGNMICNELCTKSFFQVIHIDDYSRDISFKMHDLIHDLAQSVGGQECMVLENACVTKLSKSTHHISFNSLRSVSSEEESFTEVESLRTLYQIEFIGSSDRSFLPIKQTLRVLRTNTLELSLLGSLIHLRYLELHNFDIETFPDSIYSLQKLEILKLKDLTRLSCLPKRLSCLQKLRHLVIKDCHRLFRMFPHIGKLSCLRTLNVYIINSEKGHGLDELRDLNLGGKLKIKNLQNVGSLSEAQEANLMGKKDLNELCLSWKYSDSSVKTPIISDEQVIEVLQPHMNLKSLKIHFYKGLCLPSWIVILCNLVTLVVKDCKLCERFSSLGKLPSLKKLQLFNVSVKYLDDDEFHNGMEVRVFPSLEVLKLEMLPNLVGLYKVERKGMFPCLSILETNFCPKLELPCLPSVKELTVFECNDDLLKSISSLYGLTTLTLYEGRGITSFPKEMFGNLTCLQTLKVSSFPNLKELPNEPFNLALEHLSISFCYELEYLPENIWGGLLSLQSMSIYQCNRLKCLPDGIRHLTALDWLTISGCPTLTERCKEGTGEDWDKIAHIPNLNV* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6000 1014 Gene3D - 405 496 IPR036388 -
Mal1g6000 1014 Gene3D - 139 315 IPR027417 -
Mal1g6000 1014 Gene3D - 6 118 - -
Mal1g6000 1014 Gene3D Ribonuclease Inhibitor 854 999 IPR032675 -
Mal1g6000 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 420 IPR027417 -
Mal1g6000 1014 CDD RX-CC_like 11 119 IPR038005 -
Mal1g6000 1014 Pfam NB-ARC domain 158 386 IPR002182 GO:0043531
Mal1g6000 1014 PRINTS Disease resistance protein signature 975 991 - -
Mal1g6000 1014 PRINTS Disease resistance protein signature 254 268 - -
Mal1g6000 1014 PRINTS Disease resistance protein signature 181 196 - -
Mal1g6000 1014 PRINTS Disease resistance protein signature 358 372 - -
Mal1g6000 1014 Gene3D - 322 404 IPR042197 -
Mal1g6000 1014 PANTHER DISEASE RESISTANCE PROTEIN RP 28 939 IPR044974 GO:0006952
Mal1g6000 1014 SUPERFAMILY L domain-like 471 1007 - -
Mal1g6000 1014 PANTHER OS05G0414200 PROTEIN 28 939 - -
Mal1g6000 1014 Coils Coil 31 51 - -
Mal1g6000 1014 Pfam Rx N-terminal domain 6 100 IPR041118 -
Mal1g6000 1014 Gene3D Ribonuclease Inhibitor 555 850 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6000 Mal-Chr1 137954359 137957403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6000 184 658 WRKY Transcription Factor Family AT5G45050 24.423 2.78e-07 53.1