Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5998 ATGACTGATGCCTTACTTGGTGTTGTGTTTGAGAACCTGACGTCTCTGGTTCAAAATGAATTTGCAACTCTATCTGGAATCAAGTCAAAGGCTCAAAAGCTATCAACCACCTTGGAACTGATTAAGGCTGTTCTTGAAGATGCCGAAAAGAAGCAATTAACAGACCGCTCTATTCAAATATGGCTGCAACAACTCAATGATGCGGTGTATGTGCTTGATGATATCCTTGATGAATGTTCGATAAAATCCAAGATTGCAAGCAGACTCAATCAAATTGCTGAAAGTAAGAACAAGTTTCTTCTGCGAGAAGGTGTTACTGTTACGGAAAAACCAATTGAAGTGGATGAATGGCGTCAAACCAGCTCCATTATTGCTGAACCAAAAGTGTTTGGACGAGAAGATGATAAAGAGAAGATTGTTGAGTTTCTTCTCAACCAAGCGAGGGACTCTGACTTCCCTTCCGTCTATCCCATTGTTGGTTTAGGTGGTGTTGGAAAAACGACTCTTGCTCAATTGGTCTACAACGATGATAGGGTGAGTCACAATTTTAATACAAAAATTTGGGTTTGTGTTTCAGAGGTTTTCTCAGTCAAGAGGATTTTGTGTTCCATTATAGAATTCATGACAAAAGAGAAGTGTGATGCAATGGATTTAGATGTAATACAAAGAAAGGTGCAAGAAATTCTGCAAGGTAAAAGATGTTTGTTGATTTTGGACGATGTGTGGAACACAAATCCAGAATTTGAATTAGGATTAAACCCAGAGAAATGGAATAAGTTGAAATCGGTGTTGTCTTGTGGATCCAAAGGTACTTCCGTTTTAGCGTCTACTCGTGATATGGATGTTGCATCAATCATGGGAACATGTCCAACCCTTCCTTTGTCGGTTCTCTCTGATAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGGACATGATAGACAAGAGCGTGCAGAGCTTGTGGCAATAGGCAAGGAGATAGTAAAAAAGTGTGGAGGATTGCCTCTTGCAGCTCAAGCATTGGGGTGTCTAATGCACTCAAGGAGTGAAGAAAAGGAATGGTTTGAAATTAAAGAGAGTGACCTTTGGGATTTACCGCATGAGAATTCTGTTTTGCCAGCTTTGAGGTTAAGCTACTTTCATTTATCGCCAACCTTAAAACAATGTTTCGCTTTTTGTGCTATATTTCCAAAAGATACAGAAATCATGAAGGAAGAATTGATTCATCTTTGGATGGCTAATGGATTTATTTCTTCTAGAAAAAATTTGGAGGTTGAAGATGTTGGCAACATGATTTGGAATGAATTGTGCCAAAAATCTTTCTTTCAAGACATCCATATAGATGATTATTCAAGTGACATTTCTTTCAAAATGCATGATCTCGTCCATGATCTTGCTCAATCAGTAGGGGGGCAAGAATGTATGGTTTTAGATAGTGCATACATGACTAACTTGTCAAAAAGCACACATCATATTAGTTTCGGCACTGATAATCCGGTATTATTAGAAGAGGATTCCTTCACAATAGTAGAATCATTGCGAACATTGTATCATCTAGAAAACTTTCGATTTTACTATAGAGGTTTCTTACCAATAATGCACACTCTTCGGGTTTTAAGAATAAACACTCTAGAGTTATCATTACTCGGTAGTTTAACTCATTTGAGGTATTTGGAGCTTCACAATTTGTACATAAAAACCTTGCCCGACTCAATTTATAGCTTACAAAAATTGGAAATCTTGAAATTGAAAGTTTTTCCCAAACTGAGTTGTCTACCGAAACGCTTGTCTTGCTTACAAAATCTTAAACATTTAGTCATTGAAGATTGCCGTTCGTTGAATCGCATGTTTCCTCACATTGGAAAATTATCTTGCTTAAGAACATTAAATGTTTTTATGGTTTATTCAGAGAAAGGACATAGCTTAGCGGAGTTACGTGATCTAAACTTAGGAGGAAAGCTGGAGATCAAAGGCTTACAAAATGTCGGTAGTTTATCTGAAGCTCAAGAAGCCAATTTGATGGGTAAAAAAGACCTCAATGAATTATGCTTGTCATGGAAGCGCGGTGATTCATCTATCAGGACCCCTATTATTAGTGATGATCAAGTACTTGAAGTGCTTCAACCTCACACAAATCTCAAGAGCTTGAATATATATTGTTACCAAGGAGTTTGCTTTCCAAATTGGATCGGAATTCTTAGTAATTTAGTTGCTCTTAGACTTGAGTATTGCAGGCTTTGTGAACGGCTTTCATCACTTGGTAAACTACCATCTCTAAAAAAACTTGAATTATACTTTGTGTCTGTGAAATACTTGGATGACGATGAATTTGGTATGGAGGATAGGATATTCCCATCTCTGGAGGTACTCATACTAGTAAAGTTACCAAACTTAGAGGGGCTGTTGAAAGTGGAAAGAGAGGAGATGTTTCCTTGTCTGTCTATTCTGAAAATCAATGGTTGCCCTAAACTTGAACTTCCGTGTCTTCCATCTGTTAAAGACCTCAATGTACATGGATGTAATAATGAGTTACTGAAGTCAATCTCTGGTTTTTATGGTCTTACCACCCTTTTCCTTCATGGAGGTGGAGGAATAACATCTTTTCCTAAAGAAATGTTTGGAAACCTCACTTGTCTTCAAACTCTAACTGTAACGGGTTTCCAAAATTTGAAGGAGCTACCAAATGAGCCCTTCAACCTAGCTTTGGAGCATCTCCAAATCTCTTTCTGCAATGAGCTTGAGTATTTACCAGAGAAAATATGGGGAGGTCTGCAATCACTTCAATCTATGGTGATTAGTAATTGTAGCAGATTAAAATATTTGCCAGACGGTATTAGACACCTCACTGCATTTGATTGGTTGACTATTCGCGGATGCCCAACATTGACGGAGCGATGCAAGGAGGGAACAGGGGAAGATTGGGACAAGATAGCGCATATTCCAAAACTAGAGATTTCCTAA 2964 0.3799 MTDALLGVVFENLTSLVQNEFATLSGIKSKAQKLSTTLELIKAVLEDAEKKQLTDRSIQIWLQQLNDAVYVLDDILDECSIKSKIASRLNQIAESKNKFLLREGVTVTEKPIEVDEWRQTSSIIAEPKVFGREDDKEKIVEFLLNQARDSDFPSVYPIVGLGGVGKTTLAQLVYNDDRVSHNFNTKIWVCVSEVFSVKRILCSIIEFMTKEKCDAMDLDVIQRKVQEILQGKRCLLILDDVWNTNPEFELGLNPEKWNKLKSVLSCGSKGTSVLASTRDMDVASIMGTCPTLPLSVLSDNECWLLFKQYAFGHDRQERAELVAIGKEIVKKCGGLPLAAQALGCLMHSRSEEKEWFEIKESDLWDLPHENSVLPALRLSYFHLSPTLKQCFAFCAIFPKDTEIMKEELIHLWMANGFISSRKNLEVEDVGNMIWNELCQKSFFQDIHIDDYSSDISFKMHDLVHDLAQSVGGQECMVLDSAYMTNLSKSTHHISFGTDNPVLLEEDSFTIVESLRTLYHLENFRFYYRGFLPIMHTLRVLRINTLELSLLGSLTHLRYLELHNLYIKTLPDSIYSLQKLEILKLKVFPKLSCLPKRLSCLQNLKHLVIEDCRSLNRMFPHIGKLSCLRTLNVFMVYSEKGHSLAELRDLNLGGKLEIKGLQNVGSLSEAQEANLMGKKDLNELCLSWKRGDSSIRTPIISDDQVLEVLQPHTNLKSLNIYCYQGVCFPNWIGILSNLVALRLEYCRLCERLSSLGKLPSLKKLELYFVSVKYLDDDEFGMEDRIFPSLEVLILVKLPNLEGLLKVEREEMFPCLSILKINGCPKLELPCLPSVKDLNVHGCNNELLKSISGFYGLTTLFLHGGGGITSFPKEMFGNLTCLQTLTVTGFQNLKELPNEPFNLALEHLQISFCNELEYLPEKIWGGLQSLQSMVISNCSRLKYLPDGIRHLTAFDWLTIRGCPTLTERCKEGTGEDWDKIAHIPKLEIS* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5998 987 Gene3D - 6 105 - -
Mal1g5998 987 Gene3D - 113 289 IPR027417 -
Mal1g5998 987 CDD RX-CC_like 11 82 IPR038005 -
Mal1g5998 987 SUPERFAMILY L domain-like 443 979 - -
Mal1g5998 987 Gene3D - 379 470 IPR036388 -
Mal1g5998 987 Gene3D Ribonuclease Inhibitor 502 636 IPR032675 -
Mal1g5998 987 Gene3D Ribonuclease Inhibitor 637 829 IPR032675 -
Mal1g5998 987 Gene3D Ribonuclease Inhibitor 830 971 IPR032675 -
Mal1g5998 987 PRINTS Disease resistance protein signature 923 939 - -
Mal1g5998 987 PRINTS Disease resistance protein signature 155 170 - -
Mal1g5998 987 PRINTS Disease resistance protein signature 332 346 - -
Mal1g5998 987 PRINTS Disease resistance protein signature 228 242 - -
Mal1g5998 987 Coils Coil 31 51 - -
Mal1g5998 987 PANTHER OS05G0414200 PROTEIN 28 941 - -
Mal1g5998 987 Pfam Rx N-terminal domain 6 85 IPR041118 -
Mal1g5998 987 Gene3D - 296 378 IPR042197 -
Mal1g5998 987 PANTHER DISEASE RESISTANCE PROTEIN RP 28 941 IPR044974 GO:0006952
Mal1g5998 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 394 IPR027417 -
Mal1g5998 987 Pfam NB-ARC domain 132 360 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5998 Mal-Chr1 137940542 137943542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5998 158 632 WRKY Transcription Factor Family AT5G45050 24.803 8.46e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5998 - - mtr:MTR_5g071220 1321.61