Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5986 ATGGAGCAAAAATGTCTCAGTAGTCAATACCCTAACATCACTCCCGCTATTTTCATCTCCCTGCGTTCGTTTCTACTGCTCTCTGCGATTTCATCTCCTGCTTCACGTTTGTATTTCTCCTTCAGGCCGCCTTTCGAACCAGACTTCTTCTTCGAGATGAATGTGGAATATGTGAAGGCGAAGATCTCAGTTTGGTGGAACATTGACGACTGTAAATTTCCAACAAACCTTGAGAATGTTAGCAGCATTGCTAACAATATTCGCTTAGCTCTGTCGAAAGCCAACCTTCATGGCGAACTTTCCATTTCAGCTTACGGCGACACCAATCGCATCACCAGTGAAATTCTAAACGCGCTTTCCTCCACAGGAATATCCGTCCATCACGTCACCAAAGTCTCGGATAGTTGCTTCGATGAATGTTACAAAAGGATTATTACTGATATGTCAATGTGGGCTCTAGATAATCCCAATGCTAATGTTTTGTTGATATTTGGTGATGGATGTGATGCTGTTCCAATTGTATCAAGGGCTCTTCATAAACTTTCTATGAGAAACCACAACATTCTCCTTGCTTTTCCATCACAAGTTGATGCATCACTCACTGCCGCAGCCAATATCGTTTGGCTCTGGCCCGCGCTCTTTTCTGGTGGGAGCCCTATGCCCATTGAACAGTGGTCGTCGGAACAAGTGCAGAAGCAAGGGCCGGGCGGGGAAAGTGACATCTAG 726 0.4518 MEQKCLSSQYPNITPAIFISLRSFLLLSAISSPASRLYFSFRPPFEPDFFFEMNVEYVKAKISVWWNIDDCKFPTNLENVSSIANNIRLALSKANLHGELSISAYGDTNRITSEILNALSSTGISVHHVTKVSDSCFDECYKRIITDMSMWALDNPNANVLLIFGDGCDAVPIVSRALHKLSMRNHNILLAFPSQVDASLTAAANIVWLWPALFSGGSPMPIEQWSSEQVQKQGPGGESDI* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5986 241 PANTHER LIMKAIN B LKAP 55 233 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g5986 241 Pfam NYN domain 61 204 IPR021139 GO:0004540
Mal1g5986 241 CDD PIN_limkain_b1_N_like 61 193 - -
Mal1g5986 241 PANTHER ENDONUCLEASE OR GLYCOSYL HYDROLASE WITH C2H2-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED 55 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5986 Mal-Chr1 137805875 137807138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5986 56 220 C2H2 Transcription Factor Family AT5G61190 47.590 1.68e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5986 - K17573 mtr:MTR_1g023460 312.383