Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5933 ATGGATAATACTGCTGAAAGTTTAGAAGATCATGAGATAGTTGATCTTGTGTCTAATGATTTAGAAACAAATTTGGAAAATTTTAAGTCTCATGAAGCTAATATTTGTCCTACTGTTGATATGGAATTCGACTTCATTAAGGATGTAAAAGAATTCTACACACCGTTTGCCAAGAAAGAAGGTTTCGGAGTTCGTGTTCGTTCGACTAAGCCACATTTTGTTATGCTTGTATGCGCTAATGAAGGCAAACATATAAAAAAGCGTTCAACATCAAGAACTGATTGTAAAGAATCACTTACTGTTTCAAAAGCAGGGAAGAGAAGTAAATGGGTTATAAAAACTATAAACAATGTTCACAATCATGGAATGGTTAGTCCTAAGAGTGTGTCCTATTTGCGGTGTCATAAGAAAATGAGTGCAGCAACTAAGAACCTTGTTGAGAAGTTTGACGAAGAAGGAGTACCTACAGGGAAAGTTGCTGCAATGTTTCAGGGTGGAGATAATGCTTTTTCTAGTCGGGACTGCTGGAATCATCTTAGAAATCTTAAAAGAAGAAATCTTGATGTGGGAGATGCCCAAGCTGTCTTTAAGTTTTGCAAGCGAAAACAAGTTGAGAATCCCGATTTTTTTTATGCAATACAATGTGATGATGAAGATAGAATGATAAATTTCTTCTGGGTGGATAGAAGAGCAAGATTGTCATATAAATTTTTTGGTGATGTTGTTACATTTGATACAACATATAAAACCAACAAGTATGATATGCCATTTGCACCCTTCACCGGATTGAATCATCATTTTCAATCTATCTTATTTGGTTGTGCTTTGTTGCAAGATGAGAATGAGAAGTCGTTTGAGTGGCTATTTAAAACTTGGCTAGATGCAATGGGTGGTAAATATCCAGTGTCAATAATAACAGATCAAGACTTGGCAATGAAAGGTGCCATAGCCAAGGTTTTTCCACATACTCGTCATCGGTTATGCTTGTGGCACATCAGAAAAAAAATTCCTGAGAAGCTTTCCCAACTATACCATAAAAGATCAACTTTCAAGCGTAGAATGAAATCTTGTATTCGTGATTCGCCATCTATAAAAGACTTTGAAGAAGATTGGGAACGTATTATGGTTGATTATAATTTGAAGGAGAATGAATGGCTTAAAGGGTTATACAGTATAAGAAAATCATGGATTCCTGTTTATAATAGAAATACTTTTTTTGCTGGCATGAACACTACACAAAGGAGTGAGAGTATTAATGCCTTCTTTGATTCTTTCGTTAATTCTTCAACAACACTACAATATTTTGTTGTTAAGTTTGACAAGGCAATAAATAGTCGCTATGAAAAACAAAGAAGAGAGGATTTTGAATCAAGGCATCGATTGCGACTCGTAGATATTAAGTCAAAAATTGAGGAGCATGCAGCATCAATATATACAAGAAACATTTTTGGGAAGATTCATGATGAGTTTATAAAGATTGTTCAATTTACAAAGGAAAAAATTGAAAAAAATGGGTCTCAATATAGATATAAGGTATCTAATAGTTATGACTTGAGAGACACATTTATAGTTTGTGTGGATCTGGAGACAAAGGTTGCTAATTGTGACTGCCAGCTTTTTCAGTTTATGGGATTATTATGCAGGCATATCTTGGTGATTTTTCATGCAAAAAATATTGTAGAAATACCAGACATGTATATTTTAAAGCGTTGGACAAAGGATGCTAACAAAGGTGTCATGTTTATTGAAGATGGACCAGAGTTTTCCTCTAAAGAAAACTCAGCAACTTTGCGAAGTTTACATGTACACAAACAAGCTAGTTTGTTACCCGATCTTGCAGCAAAATATGAGAAAATATATAAGATGATATCATCTGATTTGGAGGAAACATACAAAAAAGCTTTAATAATGGAAACTGAATTAGACACTGAGAGGGACACAATTCCTCCAGATGCAAGCTGTCAAAATCTGATATATGAGCAACCAAGTGTGTCTTCAGAACCAAATATCAGAGATCCACTCCCATCACAAACTAAAGGAAGAAAAAAAGATACAACAAAAGAGACTCAAAATGGAAGGATCAAAAGCAGTCTAGAGTTGTCGGTAAACCAGTCACTAGTCAAAAGAATATCTTGCCAAGTTTGTGGTCTACAAGGTCACAATAAGCGAAGTTGTAAGCGAAAGATAGGTGATGAATCTAATGACAAACATACTTAA 2217 0.3473 MDNTAESLEDHEIVDLVSNDLETNLENFKSHEANICPTVDMEFDFIKDVKEFYTPFAKKEGFGVRVRSTKPHFVMLVCANEGKHIKKRSTSRTDCKESLTVSKAGKRSKWVIKTINNVHNHGMVSPKSVSYLRCHKKMSAATKNLVEKFDEEGVPTGKVAAMFQGGDNAFSSRDCWNHLRNLKRRNLDVGDAQAVFKFCKRKQVENPDFFYAIQCDDEDRMINFFWVDRRARLSYKFFGDVVTFDTTYKTNKYDMPFAPFTGLNHHFQSILFGCALLQDENEKSFEWLFKTWLDAMGGKYPVSIITDQDLAMKGAIAKVFPHTRHRLCLWHIRKKIPEKLSQLYHKRSTFKRRMKSCIRDSPSIKDFEEDWERIMVDYNLKENEWLKGLYSIRKSWIPVYNRNTFFAGMNTTQRSESINAFFDSFVNSSTTLQYFVVKFDKAINSRYEKQRREDFESRHRLRLVDIKSKIEEHAASIYTRNIFGKIHDEFIKIVQFTKEKIEKNGSQYRYKVSNSYDLRDTFIVCVDLETKVANCDCQLFQFMGLLCRHILVIFHAKNIVEIPDMYILKRWTKDANKGVMFIEDGPEFSSKENSATLRSLHVHKQASLLPDLAAKYEKIYKMISSDLEETYKKALIMETELDTERDTIPPDASCQNLIYEQPSVSSEPNIRDPLPSQTKGRKKDTTKETQNGRIKSSLELSVNQSLVKRISCQVCGLQGHNKRSCKRKIGDESNDKHT* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5933 738 MobiDBLite consensus disorder prediction 676 690 - -
Mal1g5933 738 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 669 IPR031052 GO:0006355
Mal1g5933 738 MobiDBLite consensus disorder prediction 662 692 - -
Mal1g5933 738 Pfam SWIM zinc finger 526 558 IPR007527 GO:0008270
Mal1g5933 738 ProSiteProfiles Zinc finger SWIM-type profile. 522 558 IPR007527 GO:0008270
Mal1g5933 738 Pfam FAR1 DNA-binding domain 51 124 IPR004330 -
Mal1g5933 738 Pfam MULE transposase domain 241 335 IPR018289 -
Mal1g5933 738 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 26 669 - -
Mal1g5933 738 SMART 26again6 533 560 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5933 Mal-Chr1 137092447 137094715 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g5933 MULE 3.2e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5933 - - qlo:115970754 853.588