Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5908 ATGTTTAATCTCTGGGGTGGTTCTCAACAAGACCAGAAAACCAAAGAGGCTTATGCTGAATCCAAGATTAAAGAGCTCAAGGTTGCAATCGGACCCTTATCAGGACACAGCTTGAAGTACTGCACTGATGCTTGTCTGAAGCGATATCTGGAAGCTCGTAACTGGAATGTCGACAAGTCGAAGAAGATGTTGGAAGACACACTCAAGTGGAGATCAGTCTATAAGCCCGAAAAAATCCGCTGGGATGAGGTTGCGGTGGAAGGGGAGACAGGGAAAGTTTATAGAGCAGGTTTCCATGACAGACAGGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACTTCTTCAATGGACAATCAAATTAAGCATCTTGTGTATCTTTTGGAAAATGCTATGCTTAATCTTCCACCAGGTCAAGAACAAATGGCTTGGTTGATAGACTTCACTGGGTGGTCAATTACCAACAATGTTCCCCTCAAATCAGCCAGGGAGACCATCAGTATTCTACAGAACCATTATCCTGAGAGGCTTGGCATAGCATTTCTTTATAACCCTCCTCGAATTTTTGAAGCTTTTTGGAAGATAGTGAAGTATTTCTTGGATAACAAGACATTTCAGAAGGTGAAATTTGTCTACCCTAAAAACAAAGACAGTGTGGAACTCATGAGGTCTTACTTTGATGAGGAAAATCTTCCACGTGAATTAGGTGGAAAAAGCATATTGAACTACAACCATGAGGAGTTTTCCAAAATAATGGCTCAAGATGATTTAAAATGTGCAGATTTCTGGGGTTCTGATGATAAGCTCTCAAACCACAGGCATTGTGCAGCAGAGGTAGCTCCAGAACCAGTTTGCACTGAAACTCCAGCTACATGA 882 0.4195 MFNLWGGSQQDQKTKEAYAESKIKELKVAIGPLSGHSLKYCTDACLKRYLEARNWNVDKSKKMLEDTLKWRSVYKPEKIRWDEVAVEGETGKVYRAGFHDRQGRTVLILRPGMQNTSSMDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETISILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMRSYFDEENLPRELGGKSILNYNHEEFSKIMAQDDLKCADFWGSDDKLSNHRHCAAEVAPEPVCTETPAT* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5908 293 CDD SEC14 89 240 IPR001251 -
Mal1g5908 293 SMART sec14_4 87 242 IPR001251 -
Mal1g5908 293 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Mal1g5908 293 Pfam CRAL/TRIO, N-terminal domain 40 66 IPR011074 -
Mal1g5908 293 PANTHER GH16843P 7 292 - -
Mal1g5908 293 SUPERFAMILY CRAL/TRIO domain 81 252 IPR036865 -
Mal1g5908 293 Pfam CRAL/TRIO domain 89 239 IPR001251 -
Mal1g5908 293 Gene3D - 6 270 IPR036865 -
Mal1g5908 293 PANTHER RANDOM SLUG PROTEIN 5-LIKE 7 292 - -
Mal1g5908 293 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Mal1g5908 293 SUPERFAMILY CRAL/TRIO N-terminal domain 18 83 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5908 Mal-Chr1 136865185 136867575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5908 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 27.962 9.89e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5908 - - aprc:113847293 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5908 1 136865185 136867575 Mal1g5908 1 136865185 136867575 ECH