Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5872 ATGCTTCGTCTTCCTACCGGTCCTATGGAGCGCTCTGCCGAGGAAATGCAGTTTAACCGCCTCGGCGGTGGTTTCTCATCCTATTGCGATGGAGGAACTATAGATGGTTCATGGGTTGCTGGAAGAAGATCTAATAGTGGATTTGATGATGAACAGCTTGACATTCTTAAAGAAGTGCAGCACAACATTGATCATGGATCAGTGAAATTTGAGGTGGAGCTTTTTAGAAATAATCCATGCCGTCTAAAAATAGTAGTGGACGGTGAGAATGAAACTGACTTGATGGTGCCTTACCGATACACTCGGGATGTTATCTTTCTTGTAATTAGAGGACTTTGTTCTGCTTCAAACTGA 354 0.4322 MLRLPTGPMERSAEEMQFNRLGGGFSSYCDGGTIDGSWVAGRRSNSGFDDEQLDILKEVQHNIDHGSVKFEVELFRNNPCRLKIVVDGENETDLMVPYRYTRDVIFLVIRGLCSASN* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5872 117 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 52 IPR010433 GO:0003743
Mal1g5872 117 Pfam Plant specific eukaryotic initiation factor 4B 1 65 IPR010433 GO:0003743
Mal1g5872 117 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5872 Mal-Chr1 136363268 136364725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5872 1 28 Eukaryotic Initiation Factors Gene Family AT3G26400 75.000 6.29e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5872 - - gmx:100803366 73.1738