Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5866 ATGAGAAGGGAACAATCACAGTCTCCTTGCGTAATAGATGCGGAGCCCGATAGAATTAGTAGTTTACCAGGTCATATAATAGACCAAATTCTCTCAATTTTACCGATTAAGGAAGCAGTTAGAACAAGTATTTTATCTACCAAATGGAGGTACAAATGGGCCACACTTCCTAATCTTGTGTTTGATAGCCAATGCATCTCCGACACTTCTGAAGACCTTTTAGTTATCAAGAGCAAGCTTTCGAGAATCATTGATCATGTACTTTTACTCCATTCTGGGCCGATAAAAAAGTTCAAGCTCTCCCATCGTGAGCTCATTGGTGTGACTGATATTGATCGATGGACACTTCATCTAACCAGAAGGCCCGTTAAAGAGTTTGTGCTGGAAATCTGGAAAGGGCAACGCTATAAAATACCTTCATGCTTATTTTCCTGTCAAGGTTTACATCATTTAGAATTATTTAACTGTTGGCTTATACCACCATCAACATTTCAAGGCTTCAGGAACTTGAAGAGTCTTGATCTACAACATGTTACCTTGTCTCAAGATGCTTTTGAAAACTTAATATCCAGCTGCCCTTTGCTTGAACGATTGACATTGATGAACTTTGATGGTTTCAACTATCTTAATATTCATGCCCCAAATCTCCAGTTTTTTGACATTGGGGGTAAATTTGAGGATATTAGCTTTAAGAACACTTCTCAGTTAGCTGTGGTATCCATTGGTCTGTATGTGAACTTCGAAAGCAGTCAAAGTATATTGCATGGACGCACTAGCAATCTGGTCGAATTTTTAATTCATCTACCTCGTATACAAAGGCTGGAGATTCAAAGCTATTTTTTGAAGTATTTGGCTGTGGGGGTTATACCAGTAAAGCTTCCGACCCCTTGCATTGATCTAAGTTATCTTTCGATACGCATAAACTTCTTTGATTCAAAGGAAATTTCGTCTGCTCTTTGCCTGTTCAGAAGCTCACCTAATCTACGAGAACTCGAAATATTGGCACGGCCTGAGGAGCAGCCTGTTCCGTTTACAAACCACGCTGGTAGTTGGGAAGATGTCTATTTGGACTGGCCAGTCATGCGAGTTCGACATGTGAGAATAGATGGCATCTCTGGTATCAAACCTGAGTTAGACTTCATCAGCTTTCTACTTCTATATTCTCCTGTGCTAGAAAGGATGACTGTGAAACCTGCTTTAAACGTCGGACCGGAGTTGGTGAAAGAACTATTGCGGTTGAGGAGAGCCTCAGGACGAGCTGAAGTTATTTATCTAGACTCTGTATAA 1287 0.404 MRREQSQSPCVIDAEPDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIKSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISSCPLLERLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQSILHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLAVGVIPVKLPTPCIDLSYLSIRINFFDSKEISSALCLFRSSPNLRELEILARPEEQPVPFTNHAGSWEDVYLDWPVMRVRHVRIDGISGIKPELDFISFLLLYSPVLERMTVKPALNVGPELVKELLRLRRASGRAEVIYLDSV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5866 428 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Mal1g5866 428 SUPERFAMILY F-box domain 16 64 IPR036047 GO:0005515
Mal1g5866 428 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 12 394 - -
Mal1g5866 428 SUPERFAMILY RNI-like 136 333 - -
Mal1g5866 428 PANTHER F-BOX PROTEIN-LIKE 12 394 - -
Mal1g5866 428 Gene3D Ribonuclease Inhibitor 115 346 IPR032675 -
Mal1g5866 428 Pfam Leucine Rich Repeat 169 193 IPR013101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5866 Mal-Chr1 136297049 136299655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5866 5 203 EF-hand Containing Proteins AT5G41840 27.149 3.85e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5866 - - gmx:100782183 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5866 1 136297049 136299655 Mal1g5866 1 136297049 136299655 ECH