Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5861 ATGTCAGTCCACTCTGCCAACAAAGGCCCATTTCCATCTTGGGTTAACCCAAGTGTCCAAAAGTTGGTGCGAAAAAATACAAAACAAGTTTTTGATGTTGTTGTTACAGCTGATGGTACTGGGAATTTCACCAAGGTTATGGATGCTGTGACTGCTGCTCCTGACTCTAGTGTGAAGCACTACGTGATACTCATAAAGAAGGGTGTTTACAAGGAATATGTTGAAGTCAATAAGAGGGGACTATCATGA 249 0.4177 MSVHSANKGPFPSWVNPSVQKLVRKNTKQVFDVVVTADGTGNFTKVMDAVTAAPDSSVKHYVILIKKGVYKEYVEVNKRGLS* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5861 82 Pfam Pectinesterase 32 79 IPR000070 GO:0030599|GO:0042545
Mal1g5861 82 Gene3D - 6 81 IPR012334 -
Mal1g5861 82 SUPERFAMILY Pectin lyase-like 32 79 IPR011050 -
Mal1g5861 82 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 8 79 - -
Mal1g5861 82 PANTHER PECTINESTERASE 8 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5861 Mal-Chr1 136231895 136232143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5861 11 79 Carbohydrate Esterase AT3G43270 57.971 5.37e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5861 K01051 - jre:108993586 91.2781