Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5860 ATGATCATTCTCATCTTCTTCACTTGCCTTCCCTTCACTTTTTGCTCTAGTCACAATAGACTAGAGTGTATAAAAATACCACCACCTCAATTTGCTCATTCATTGAAGAGTGTTGTAGACAAATTCCATGATCTTACATCGGTTCTACACTTTGAGCTGAGCAATGTTGATGGTCTTGCTGACATTCACCTTCCAAATGTCATTTCATTATGCTTGGAGCTGCTAGACATTTCTCTTGAAGAACTTAGTTGGTGTGAAGCTGCCTTGGAGAGTCCCAAAGGAAAATACTATGGCACAAGTAACCTAAGTTCTGATTTAAGGACATGGTTAAGTGCTATTCATGCCAATTCGGATACATGCATGGATGGACTTAAAGAAACCAATTACCAAATCAAAGATAAAGTGTCCATCAAAATTGATGATTCATTGGTTAATGATCTCCTCACCAATGTTGAAGTGCAAACCATTTGA 471 0.38 MIILIFFTCLPFTFCSSHNRLECIKIPPPQFAHSLKSVVDKFHDLTSVLHFELSNVDGLADIHLPNVISLCLELLDISLEELSWCEAALESPKGKYYGTSNLSSDLRTWLSAIHANSDTCMDGLKETNYQIKDKVSIKIDDSLVNDLLTNVEVQTI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5860 156 CDD PMEI-like_4 1 129 - -
Mal1g5860 156 Pfam Plant invertase/pectin methylesterase inhibitor 66 137 IPR006501 GO:0004857
Mal1g5860 156 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 27 153 - -
Mal1g5860 156 PANTHER PECTINESTERASE 27 153 - -
Mal1g5860 156 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 153 IPR035513 -
Mal1g5860 156 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 134 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5860 Mal-Chr1 136229674 136231002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5860 4 151 Carbohydrate Esterase AT3G43270 36.250 5.28e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5860 K01051 - gmx:100801813 114.39