Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5855 ATGTCTTCTTCATTTCTTTGTTCTCTCCTTCTCCTTCTCATACTCATTTTCTCATCTCAACTCAGCACAGCAGACATTGACCAAGAAAAGAAATTCCAATACTTCTGTGATAAAGATAACGATGTTGATAACTACACAACCAACAGCACCTACCACACAAACCTTAACACCCTTCTAACTTCCAACAAAGAAATCAACTACGGTTTCTATAATTCCTCTTATGGCATAAAAACCGACAAAGTAAACGCTATTGGACTATGTAGAGGAGATATCAAACCCGATGATTGTCAAAATTGCCTCAAGAATTCAACTGTCTTCCTAACACAACTTTGTCAAAATCGAAAAGAAGCAATTGGTTGGTACGATGAAGATACATGCATGTTGCGTTACTCAAACCGTTCAATATTTGGTGTCAATGAAATTATACCTGCTTATTTCGGATGGAGTTTGAACAACGCAACAAATGAAGATGAATTTGATAAAGTGCTGAAAAAATTGTTGGATAATTTAAGAATTAGAGCTTCATCAGGGGACAGTCACCTTAAATATGCTGTAGGAAGTGATAAGGTTGGTCCAAATAATAATAATCAAACTATATATGCTCTTGTTCAATGCACACCTGATTTGTCTAAAACATTGTGTGATGATTGTTTGGTTCAATCTATTGAAACAATCCCAAGATGTTGTAACAATAGGTTAGGTGCTAGAATTGTTAGACCAAGTTGTTATTTGAGATATGAAACCGATTCACTCTTCTATCAACCAACGACAGATTCACCATCACCATCATTCTCATCTCTTCCTCCATTTGCACAAAACACTTCCTCTACAGAAGTTCAAGAAGAAGAAGAAGACGACAATATTGATATTACTAGTGAGCGACTACAATTCAATTTCAACACCATACGTATTGCTACAAATGATTTTTCAGATTCTGATAAACTTGGAAAAGGCGGATTTGGGTTCGTTTACAAAGGTAGGCTTACCAATGGACAAGAGATTGCTGTCAAAAGGTTATCAATGGATTCTGGACAAGGAGATCTAGAGTTTAAGAATGAAGTGTTTTTAGTGGCTAAACTTCAACACCGAAATTTAGTTAGATTACTCGGTTTCTGCCTAGAAGGAAGAGAAAGACTACTTGTATATGAGTTTGTTCATAATAAAAGTCTTGATTGCTTTATTTTTGATCAAGCAAAGAGAGCGCAATTAAATTGGGGAAGGCGCTACAAAATCATTTTAGGTATTGCTCGAGGCATACTTTACCTCCACGAGGACTCTCGAGTGCGTGTTATTCATCGTGATCTTAAAGCAAGCAATATTCTCTTGGATGAACAGATGAATCCTAAGATAGCTGATTTTGGCATGGCAAGACTTTTTGGTGTCGACCAATCCCAGGAGAACACAAATAGAATTGTGGGAACCTATGGATATATGGCACCCGAGTATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTCTTCAGTTTTGGTATATTGGTTCTTGAAATTGTAAGTGGTGCAAAAAACAGTGGCATTCGTGATGGGGAGAATATAGAATATCTCTCGAGTTTTGCATGGAGAAATTGGAAGGAGGGGACAGCAACAAATATCATAGATCCAACATTAAACAATGATTCACGAAATGAAATAATGAGATGTATCCATATTGGATTACTTTGTGTTCAAGAGAATGTAGTTAGCAGGCCAACTATGGCTTCTGTTGTAGTAATGCTTAATAGCAATTCTGTTACTCTCCCAATGCCTTTGGAACCTGCATTTCATATGGATAGCAGAAACTTTCAAGATATGAAATCGTGGGCTCATAGTTCATCTCAAGAATCTATCAACGGGGCTTCAAATACAGAGCCATTTCCTCGCTAG 1884 0.3694 MSSSFLCSLLLLLILIFSSQLSTADIDQEKKFQYFCDKDNDVDNYTTNSTYHTNLNTLLTSNKEINYGFYNSSYGIKTDKVNAIGLCRGDIKPDDCQNCLKNSTVFLTQLCQNRKEAIGWYDEDTCMLRYSNRSIFGVNEIIPAYFGWSLNNATNEDEFDKVLKKLLDNLRIRASSGDSHLKYAVGSDKVGPNNNNQTIYALVQCTPDLSKTLCDDCLVQSIETIPRCCNNRLGARIVRPSCYLRYETDSLFYQPTTDSPSPSFSSLPPFAQNTSSTEVQEEEEDDNIDITSERLQFNFNTIRIATNDFSDSDKLGKGGFGFVYKGRLTNGQEIAVKRLSMDSGQGDLEFKNEVFLVAKLQHRNLVRLLGFCLEGRERLLVYEFVHNKSLDCFIFDQAKRAQLNWGRRYKIILGIARGILYLHEDSRVRVIHRDLKASNILLDEQMNPKIADFGMARLFGVDQSQENTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEIVSGAKNSGIRDGENIEYLSSFAWRNWKEGTATNIIDPTLNNDSRNEIMRCIHIGLLCVQENVVSRPTMASVVVMLNSNSVTLPMPLEPAFHMDSRNFQDMKSWAHSSSQESINGASNTEPFPR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5855 627 CDD STKc_IRAK 315 580 - -
Mal1g5855 627 Pfam Protein tyrosine and serine/threonine kinase 313 577 IPR001245 GO:0004672|GO:0006468
Mal1g5855 627 SMART serkin_6 309 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5855 627 SUPERFAMILY Protein kinase-like (PK-like) 293 612 IPR011009 -
Mal1g5855 627 Gene3D Transferase(Phosphotransferase) domain 1 385 586 - -
Mal1g5855 627 Gene3D Phosphorylase Kinase; domain 1 270 384 - -
Mal1g5855 627 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Mal1g5855 627 MobiDBLite consensus disorder prediction 606 627 - -
Mal1g5855 627 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 6 268 - -
Mal1g5855 627 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 277 613 - -
Mal1g5855 627 Gene3D - 144 250 IPR038408 -
Mal1g5855 627 Gene3D - 32 134 IPR038408 -
Mal1g5855 627 ProSiteProfiles Gnk2-homologous domain profile. 141 251 IPR002902 -
Mal1g5855 627 MobiDBLite consensus disorder prediction 255 286 - -
Mal1g5855 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Mal1g5855 627 MobiDBLite consensus disorder prediction 255 277 - -
Mal1g5855 627 Pfam Salt stress response/antifungal 151 248 IPR002902 -
Mal1g5855 627 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Mal1g5855 627 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 277 613 - -
Mal1g5855 627 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 268 - -
Mal1g5855 627 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
Mal1g5855 627 ProSiteProfiles Protein kinase domain profile. 309 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5855 Mal-Chr1 136175595 136181587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5855 40 627 Receptor kinase-like Gene Family AT4G38830 48.830 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal1g5855 PK_Tyr_Ser-Thr 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5855 - - mtr:MTR_0341s0020 857.44