Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5852 ATGCAAAGTGGCAGAGCAACTGAGAAGACTGATGTTTATAGTTTTGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAGCGGCCAACAGATGCATCCTTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTCCTTATTACTGAAAATAGGCCGAGGGAAATTGTCGATTCACTATGCGACGGGGTGCAGGTGGAGAGCCTTGATGCTTTGCTCTCTATGGCTATTCCGTGTGTTTCCTCAAGTCCAGAGGATCGACCCACTATGCATCGAGTGGTCCAGTTGCTTGAATCGGAGGTCGTAACTCCATGCCCAAGTGACTTCTATGATTCAAACTCCGACTAG 348 0.4626 MQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRPREIVDSLCDGVQVESLDALLSMAIPCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5852 115 PANTHER RECEPTOR-LIKE PROTEIN 55 1 115 - -
Mal1g5852 115 Pfam Protein tyrosine and serine/threonine kinase 2 97 IPR001245 GO:0004672|GO:0006468
Mal1g5852 115 SUPERFAMILY Protein kinase-like (PK-like) 3 104 IPR011009 -
Mal1g5852 115 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Mal1g5852 115 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 1 115 IPR031071 GO:0004672|GO:0005524|GO:0030244
Mal1g5852 115 ProSiteProfiles Protein kinase domain profile. 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5852 Mal-Chr1 136136924 136137990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5852 1 106 Receptor kinase-like Gene Family AT2G35620 83.962 2.14e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Mal1g5852 PK_Tyr_Ser-Thr 3.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5852 - - gmx:100819230 219.935