Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5851 ATGGAGGAGTTTCTTTTGAAAACAATTGGATTGAACATTAAAATAGGAGATGTTAGTGAGGGAGTTCCAATCATAAAGGAAAGGCTATGTAGAAAGAAGATTCTTTTGATTCTCGATGATGTTGACAATGTGAAACAACTGCAAGTTTTGGCTGGAGGAGTTGATTGGTTCGGTCCTGGAAGCAGAGTCATCATTACTACTCGAGACAAACACTTACTAATTAGTCATGAGATAGAAAGAACATATGCTATACAAGGGTTGCATGAGACAGAAGCTCTTGAATTGTTGAGGTGGACGTCTTTTAAAAATAATGAAGTTCCTTCAAGTTATGAAGACATTTTAAATCGTGTAGTTACATATGCTAATGGCCTACCGTTAGTTATTGAAATAGTGGGTTCCAACTTGTTTGGAAAGAGAATAGAAGAATGGAAGTATACGTTAGACGGGTATGAAAACATTCCCAATAATAAGATCCAAGAGATACTTAAAGTAAGCTATGATGATTTGCAAGAAGAGGAGCAAAGTGTGTTTCTGGATATTGCTTGTTGCTTCAAAGGGTGTAAATGGGTGGAAGTCGGAGATATACTTCATGCTTATTATGGTCATTGCATAAAACATCATGTTAGAGTTTTAGCTGAAAAATCTCTCATATACCATTGGAAATATGATGGTGATGTGACCTTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAACAATCACTTAAAGAGCCTGGAGAACGCAGTAGGTTGTGGTGTCATGATGATATAGTTCACGTTTTACAGGAAAACACGGGAACTAGTAAAATTGAAATGATATATCTGAACTGCCCCACGGAAGCTGTAATAAGCTGGAATGGAAAGGCCTTCAAGAAGATGATAAATCTCAAAACACTAATCATAAAAGGTGGTCATTTTTCCAAAGGCTCCCGACATTTTCCAAGTAGTCTGAGAATATTAGAATGGCAAAGATATCCTTTACAGTGTATATCATTTAGCATTTCGAACAAGGTAAGTGAAATAAGTTCAATTTTTTATTATGCATACTTATAA 1062 0.3616 MEEFLLKTIGLNIKIGDVSEGVPIIKERLCRKKILLILDDVDNVKQLQVLAGGVDWFGPGSRVIITTRDKHLLISHEIERTYAIQGLHETEALELLRWTSFKNNEVPSSYEDILNRVVTYANGLPLVIEIVGSNLFGKRIEEWKYTLDGYENIPNNKIQEILKVSYDDLQEEEQSVFLDIACCFKGCKWVEVGDILHAYYGHCIKHHVRVLAEKSLIYHWKYDGDVTLHDLIEDMGKEVVRQQSLKEPGERSRLWCHDDIVHVLQENTGTSKIEMIYLNCPTEAVISWNGKAFKKMINLKTLIIKGGHFSKGSRHFPSSLRILEWQRYPLQCISFSISNKVSEISSIFYYAYL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5851 353 Gene3D - 86 170 IPR042197 -
Mal1g5851 353 PANTHER ARCHAEAL ATPASE 2 341 - -
Mal1g5851 353 SUPERFAMILY "Winged helix" DNA-binding domain 156 265 IPR036390 -
Mal1g5851 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 180 IPR027417 -
Mal1g5851 353 Gene3D - 6 80 IPR027417 -
Mal1g5851 353 Pfam NB-ARC domain 25 168 IPR002182 GO:0043531
Mal1g5851 353 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 341 IPR044974 GO:0006952
Mal1g5851 353 PRINTS Disease resistance protein signature 28 42 - -
Mal1g5851 353 PRINTS Disease resistance protein signature 121 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5851 Mal-Chr1 136134238 136135599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5851 13 341 WRKY Transcription Factor Family AT4G12020 32.945 2.68e-43 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5851 - - mtr:MTR_6g072590 500.745