Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5850 ATGGCTATTCCTTCCTTATTTTGCTCTCTCCAAATTCTCCTAATCATAATTTTCACATCTCAAACCAAAGCTGTATATGACGAAATAAACTTATACCACTACTTTTGTGATCAAGACAACAATAGAGGCAACTACACAACCAATAGCACCTATCACAAAAACCTCAACACACTTTTATCTACTCTCACTTCCAATACAGAAATCAACTATGGTTTCTACAATTTTTCATTCGGCGAAAACCGCGACAAAGTCTACTCAATCGGACTCTGTCGAGGTGATCTTCTACCGAATGATTGTCGTGGTTGCCTCGGCAGTGCCAGAACAAATCTAACACGTATTTGTCCAAATCGAAAAGAGGCTATTTTTTGGTCCGAAGACGAAAAATGCATGTTACGTTATTCGGACCGATTAATATTAGGTGTCATGGAAGATGATCCTATGTTTTATTCAAATAATGATGATGATTCAGTTGATGTTGATTTATCTAATGAAGTTGTTACCAATTTGTTGAATGATTTAACAAGTAGAGCTGTGAAAGGTGATTCTAGGATTAAATATGCTGCAGATAGTCAACCTGGTCCTAAGTATGAAATTATATATGGTTTGGTTCAGTGTACACCTGATTTGTCTCAAACAGCTTGTAATTCATGTTTGGTTGAAAATCTTCAACAAATTCCTGGTTGTTGTAAAAATAAGATTGGCGGAAGAGTTGTTAGGCCTAGTTGTAACATGAGATTTGAAACTTCTTACCTTTTTTATGAGCCTAGAGCATCACCGCCGCCACCACCACCATCACCTCCTCCGCCCACCGCTACCGGTGGTAATACTTCCTCACAAGGAAAAAGTAACAACAGTTCTACCATTGGCATCGCTGTAGGGGTACCAATTGCTCTTGTTGCTGTGGTCTTCATTTTTATCTACATCTATTTAAGAGTAAGGAAGCCAAAGAAAAGTTTTGAAGAAATTCAAGAAGAAGAAGAAGATGAAGAAGATAAAATTGAAAGTTCTGAGGCACTACAACTTAACTTCAACACCATACGTAATGCTACAAATGATTTCTCGGATTATAATCAACTTGGAGAAGGCGGATTCGGGGTGGTTTACAAAGGTAGGCTATCCAATGGACAAGAAATTGCTGTTAAAAGGTTGTCAATGAATTCTGGACAAGGAGATTCAGAGTTTAAGAATGAGGTGCTTTTGGTGGCTAAGCTTCAACACCGAAATTTAGTTAGACTACTTGGCTTTTGTCTAGAAGGAAGAGAAAGAGTACTTGTATATGAATATGTTCCTAATAAAAGTCTTGATTATTTCATTTTTGATCAAGCTAAGAGAGCGCAGTTGAATTGGGAAATGCGCTACAAAATCATTTTAGGTATTGCCCGAGGCATTCTTTACCTTCATGAGGATTCTCGGCTGCGCATTATTCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGAAATGAATCCTAAGATATCTGATTTTGGCATGGCAAGACTTTTTGGTGTTGACCAAACACAGGAAAACACAAAAAGAATTGTGGGAACCTACGGATATATGGCACCTGAATATGCAATGCACGGACAATTTTCAGTGAAGTCAGATGTCTTCAGTTTCGGTATATTGGTTCTTGAAATTGTAAGTGGTTCAAAAAACAGTGGCATTCGTGATGAGGAGAATACGGAGTATCTCTCGAGCTTTGCATGGAGAAATTGGAAGGAAGGGACTGCAACAAATATCATAGATCCCACATTAAACAATGATTCACGAAATGAAATATTGAGATGTATCCATATTGGATTACTTTGTGTTCAAGAAAATATAACTAGCAGGCCAACTATGGCTTCTGTTGTAGTAATGCTTAATAGCAATTCTGTTACTCTTCCAATGCCTTTAGAACCTGCATTTCATATGGATAGCAGAAACTTTCAAGAAATGAAATCTTGGGGTCATAGTTCAGCTCAAGAATCAGTGAATGAGACTTCAAATACAGAGCTATTTCCTCGCTAG 2016 0.3765 MAIPSLFCSLQILLIIIFTSQTKAVYDEINLYHYFCDQDNNRGNYTTNSTYHKNLNTLLSTLTSNTEINYGFYNFSFGENRDKVYSIGLCRGDLLPNDCRGCLGSARTNLTRICPNRKEAIFWSEDEKCMLRYSDRLILGVMEDDPMFYSNNDDDSVDVDLSNEVVTNLLNDLTSRAVKGDSRIKYAADSQPGPKYEIIYGLVQCTPDLSQTACNSCLVENLQQIPGCCKNKIGGRVVRPSCNMRFETSYLFYEPRASPPPPPPSPPPPTATGGNTSSQGKSNNSSTIGIAVGVPIALVAVVFIFIYIYLRVRKPKKSFEEIQEEEEDEEDKIESSEALQLNFNTIRNATNDFSDYNQLGEGGFGVVYKGRLSNGQEIAVKRLSMNSGQGDSEFKNEVLLVAKLQHRNLVRLLGFCLEGRERVLVYEYVPNKSLDYFIFDQAKRAQLNWEMRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFGVDQTQENTKRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEIVSGSKNSGIRDEENTEYLSSFAWRNWKEGTATNIIDPTLNNDSRNEILRCIHIGLLCVQENITSRPTMASVVVMLNSNSVTLPMPLEPAFHMDSRNFQEMKSWGHSSAQESVNETSNTELFPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5850 671 Coils Coil 319 339 - -
Mal1g5850 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 657 - -
Mal1g5850 671 Pfam Salt stress response/antifungal 165 248 IPR002902 -
Mal1g5850 671 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Mal1g5850 671 Gene3D - 147 250 IPR038408 -
Mal1g5850 671 Gene3D - 32 137 IPR038408 -
Mal1g5850 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Mal1g5850 671 MobiDBLite consensus disorder prediction 649 671 - -
Mal1g5850 671 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Mal1g5850 671 MobiDBLite consensus disorder prediction 253 283 - -
Mal1g5850 671 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 657 - -
Mal1g5850 671 ProSiteProfiles Protein kinase domain profile. 353 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5850 671 MobiDBLite consensus disorder prediction 255 271 - -
Mal1g5850 671 Pfam Protein tyrosine and serine/threonine kinase 357 621 IPR001245 GO:0004672|GO:0006468
Mal1g5850 671 Gene3D Transferase(Phosphotransferase) domain 1 429 630 - -
Mal1g5850 671 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Mal1g5850 671 CDD STKc_IRAK 359 624 - -
Mal1g5850 671 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Mal1g5850 671 SMART serkin_6 353 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5850 671 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
Mal1g5850 671 SUPERFAMILY Protein kinase-like (PK-like) 340 654 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5850 Mal-Chr1 136103806 136106508 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5850 25 671 Receptor kinase-like Gene Family AT4G21410 50.301 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal1g5850 PK_Tyr_Ser-Thr 6.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5850 - - lang:109335396 805.438