Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5818 ATGGTGACAAGTGGTTTTAAGGAATTGATTGGTGAAGGTGGTTTTGGAAGAGTTTACAAGGGTTGTCTCCCAACCGGCCAGCTTGTTGCCGTAAAACAATTAGATCCTAATGGTCTTCAAGGTTGTAAAGAATTTGTGACAGAGGTTCTTATGCTATGCATGCTGAGTCATTCTAATCTTGTTAATTTAATTGGCTATTGCACCAATATAGATCAAAAGCTTTTGGTTTATGAGTACATGCCTAAGGGATGTCTTGAAGATCATCTTTTTGATCTTACCCAAGACAAAGAACCTCTAAGCTGGAGTTCTCGAATGAAGATTGCTGTTGGAGTAGCTCGAGGTCTTGAGTATCTGCATTGTAAAGCAGACCCCTCTATTATCTATCGAGACATGAAATCTGCGAACATTTTATTGGACAATGACTTCAACGCAAAACTGTCAGATTTTGGTCTTGCTAAACTAGGACCTATTGGAGACAACACTCATGTTTCTACCAGAGTAATGGGTACACAAGGCTACTGTGCACCAGAATATGCTATGACTGGAAAATTAACTCAACAATCTGATATCTACAGTTTTGGTGTGGTTTTGTTAGAGTTGATCACTGGACGTAGAGCACTAGATGATAGTAGAAAAAGAGGAGAGCGTGACTTAATTTCATGGTCTCGCCCATTCTTTAACGACCAGAGAAAGTATAAACATATGGTTGACCCTCTTTTGCAAGGAAACTTCCCCAATCGCAGTTTGCATCAAATAATCTATATGATTGCTATGTGTCTCCATGAGAAACCAAAATCTCGTCCACTCATTGGAGAAATTGTTTATACACTGGAGTATCTAGCTTCTCAGAGTACCCCTGAAGTCCATGGACATGGTTTGCGCAGCCGGCCGTTGCAACCATTTTTCAAATCGGAGATAAATTAA 924 0.3994 MVTSGFKELIGEGGFGRVYKGCLPTGQLVAVKQLDPNGLQGCKEFVTEVLMLCMLSHSNLVNLIGYCTNIDQKLLVYEYMPKGCLEDHLFDLTQDKEPLSWSSRMKIAVGVARGLEYLHCKADPSIIYRDMKSANILLDNDFNAKLSDFGLAKLGPIGDNTHVSTRVMGTQGYCAPEYAMTGKLTQQSDIYSFGVVLLELITGRRALDDSRKRGERDLISWSRPFFNDQRKYKHMVDPLLQGNFPNRSLHQIIYMIAMCLHEKPKSRPLIGEIVYTLEYLASQSTPEVHGHGLRSRPLQPFFKSEIN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5818 307 CDD STKc_IRAK 10 278 - -
Mal1g5818 307 SMART serkin_6 4 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5818 307 PANTHER OS07G0668900 PROTEIN 8 284 - -
Mal1g5818 307 SUPERFAMILY Protein kinase-like (PK-like) 7 278 IPR011009 -
Mal1g5818 307 PIRSF ILK 7 291 - -
Mal1g5818 307 ProSitePatterns Protein kinases ATP-binding region signature. 10 32 IPR017441 GO:0005524
Mal1g5818 307 Gene3D Phosphorylase Kinase; domain 1 10 80 - -
Mal1g5818 307 Pfam Protein kinase domain 7 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5818 307 ProSiteProfiles Protein kinase domain profile. 4 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5818 307 Gene3D Transferase(Phosphotransferase) domain 1 81 291 - -
Mal1g5818 307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Mal1g5818 307 PANTHER OS07G0668900 PROTEIN 8 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5818 Mal-Chr1 135570781 135572308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5818 2 282 Glycoside Hydrolase AT3G07070 61.268 3.37e-129 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal1g5818 Pkinase 7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5818 - - jre:109002945 440.654