Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5808 ATGTGTTGTCAAGAAGAGGTTGAAGCATTCCTTTGTTATATCATCAAGATTGCAACTATTGCGATGCCTGATATCATAGTCATTTACTTTGTGATCTTCAACGACTCCAATGATCAATATTCCCCGGTCGAGTTCAACATAACTGAAGCCTCAATCACGCAGTTCAACCTCACAAACAACACCTTAGATTATAATTTTCAGGTCAACATTACAGCACGAAACTCCGGCAATAAGATGAAATTTTATCAAAAGATTAATGCAATTTCTTCGTATAAAGGTAATGAATTTGCATGGGCACCTATGCCAACCATTATCCTAGGCAAGGAGAATACCGCTGTGCTAGGACCCATAGTGTTTAAAGGGAATAAAGTGATTAAACTCGAGCCTCAACAACTTGTTGAGTATGATAATGAGATGCAATTGGGAGTTTACAATTTAGATTTTGAACTCTACCCAATTGTGCATTGTTCTAATTTGAGAATTCCTTTAACTATCAATGGTGTGGCACCTACTTTCAATATCATCACATGCTCTCCACATATGTAA 546 0.37 MCCQEEVEAFLCYIIKIATIAMPDIIVIYFVIFNDSNDQYSPVEFNITEASITQFNLTNNTLDYNFQVNITARNSGNKMKFYQKINAISSYKGNEFAWAPMPTIILGKENTAVLGPIVFKGNKVIKLEPQQLVEYDNEMQLGVYNLDFELYPIVHCSNLRIPLTINGVAPTFNIITCSPHM* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5808 181 PANTHER OS05G0367900 PROTEIN 25 178 IPR044839 GO:0098542
Mal1g5808 181 PANTHER HARPIN-INDUCED 1 25 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5808 Mal-Chr1 135420493 135421038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5808 36 171 SNARE and Associated Proteins AT1G32270 28.571 5.22e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5808 - - mtr:MTR_2g048270 120.168