Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5802 ATGGCTCTCAATTGTCGTTCAAATAATAATATCACACCGAGTGATGATGAACTTCTTCGATCATTCCTCTACAACAAAATTCACAATAAACTAGTCCCCAACTATATCACCGTTCTTGAACTAGATTTGTTTGGTACCGAAAAGAATCCTTGGAAGATTTGGGAAGATTTTTCAGCTAATTCGTATTGTGAAAGAGACATATATTTCTTCACTACCTTAAAGAAGAAATCTGCCACTAGTAAACGCTGGATTCGTACTATTGGAATTGGTACGTGGGAAGGTGAAGATACCGGAACAAGCATATTCGCCAAAAAGACTAAACAACTCCTTGGTGTGAAAAAACGTTATCGCTTTGAGAAGAGTGGCACTTCCGAAGATGGTAGATGGATCTTGCATGAATATAGCCTTGACAAATCTTTGATTCACAATGCTTCGGCCAACAATTATGTTCTATGCAGATTTAGAAAGAATTTGAAACACAATCCACAAAAAACAACAACAAACGTTGGACAAGATAGGCAAGGAAAGACGGTTGTTCCCGGACCTGCGGAAAACGGCATATCTGTAAGTTACCACACTATATTTAGCTACTAA 594 0.3805 MALNCRSNNNITPSDDELLRSFLYNKIHNKLVPNYITVLELDLFGTEKNPWKIWEDFSANSYCERDIYFFTTLKKKSATSKRWIRTIGIGTWEGEDTGTSIFAKKTKQLLGVKKRYRFEKSGTSEDGRWILHEYSLDKSLIHNASANNYVLCRFRKNLKHNPQKTTTNVGQDRQGKTVVPGPAENGISVSYHTIFSY* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5802 197 SUPERFAMILY NAC domain 12 155 IPR036093 GO:0003677|GO:0006355
Mal1g5802 197 ProSiteProfiles NAC domain profile. 5 157 IPR003441 GO:0003677|GO:0006355
Mal1g5802 197 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 12 174 - -
Mal1g5802 197 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 174 - -
Mal1g5802 197 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Mal1g5802 197 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5802 Mal-Chr1 135261744 135262595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5802 13 158 NAC Transcription Factor Family AT5G62380 32.450 2.11e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal1g5802 NAM 8.6e-18 No_clan