Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5753 ATGCGTGGATTGCGAAAATCGAAGAGGATTTCATGGGCTTCCGATTTAGATCTTTGTCAGGTTAGGTTATTCTTATCTGAGGAACCTCCTTCACAAGTTGGGTTGAATTCTCAAGATCACCTCCAAGCAAAGATATCATCCTTGTTGCATCAAGGAGAAGCTGGTTCTGATGATATTTTACCTCCTGGATTTGAGGGAACTCATGCTTCAAGTCAGTTTGACATTAAGCTGTCCGAAATACCAGTTATTAGCTGGATTAATCCACCTAAGATCGTGCTAGATCTCACATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGATATTTGATCAACATCAGAGGGAGATGAGAGTCCTTGAAGCTATTTATCCACGAATATCTTCCATTCCTCCAAATCCTATTTCAGTGGATGTTGACGATTCCCATTACACTGATGATCATATTGCCGTGATCCCAATTACGCCTGTTGAAGACGGGGATGTGGCAGCAGATACATTATCTCCTGGTATATTGGATGGTCCAAACTCTGCTACAACTATGTCGATGGTGTCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAGCTTAGTGAATAGCAGTGAACATGGTAATTTGATTGACCATGAATTACTCAAAAATATTCTCAACAATCCGGAAGTGATTGAGAAGTTGGTTAGAAATTATAATGTTCAAAATGCACAGTATGTACAAAACACGGGATCATCATCAGGTGTTTTTTCACATCCTGCTAATCCCATTAATCAAGTTGAAACCACTACAACATCATCAAATGCTTTTTCATCCACTTCTTCCTATACTCACACAACTGGAGGTCAGATGGTGCCAACTATTTCTACTCAATGGCATCGGAGGCCTGACACGAGTTCAGCTATTGCTGCTACTCCTGTTGAGGTCCCTTCAACAAAAGATGTAAACTACTATAAGAGCTTGATTCAACAACATGGAGGAGATAAACAAGAAGCACTTCCATACTCCTCCAGTAATCGTCAGAACCAGCAACCATTATCAAACTATGATACAGTACACAATTTTAGAGCAAAAGGGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAATAGTTCCAGAGGATGTAGGAATGGAGCTAACTGTACCTTTCAGCATGATACATCATTTCAGCCACAGCAAGGTAATCCCGCGCCAGGGATGCATAGTTCAAAGAGAATGAAAATGGATAATGAGATCAGCAGTTAA 1239 0.406 MRGLRKSKRISWASDLDLCQVRLFLSEEPPSQVGLNSQDHLQAKISSLLHQGEAGSDDILPPGFEGTHASSQFDIKLSEIPVISWINPPKIVLDLTWQVVAGEESKEIFDQHQREMRVLEAIYPRISSIPPNPISVDVDDSHYTDDHIAVIPITPVEDGDVAADTLSPGILDGPNSATTMSMVSDVAAASVALTSLVNSSEHGNLIDHELLKNILNNPEVIEKLVRNYNVQNAQYVQNTGSSSGVFSHPANPINQVETTTTSSNAFSSTSSYTHTTGGQMVPTISTQWHRRPDTSSAIAATPVEVPSTKDVNYYKSLIQQHGGDKQEALPYSSSNRQNQQPLSNYDTVHNFRAKGSKPKIMKPCIFFNSSRGCRNGANCTFQHDTSFQPQQGNPAPGMHSSKRMKMDNEISS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5753 412 ProSiteProfiles Zinc finger C3H1-type profile. 358 386 IPR000571 GO:0046872
Mal1g5753 412 SUPERFAMILY CCCH zinc finger 363 385 IPR036855 GO:0046872
Mal1g5753 412 MobiDBLite consensus disorder prediction 384 412 - -
Mal1g5753 412 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 176 - -
Mal1g5753 412 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 176 407 - -
Mal1g5753 412 MobiDBLite consensus disorder prediction 326 343 - -
Mal1g5753 412 MobiDBLite consensus disorder prediction 322 343 - -
Mal1g5753 412 MobiDBLite consensus disorder prediction 259 278 - -
Mal1g5753 412 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 176 - -
Mal1g5753 412 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 176 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5753 Mal-Chr1 134586864 134590975 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal1g5753 zf-CCCH 0.00026 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5753 - - cam:101501814 597.045