Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5625 ATGGAATCAACATGCGTGGATACTTCACTCAACCTTAACATTAATGTTCCTTCTATACTCAAGGACGAAGTTTTGGTTGAAGAGTTACATCGTCTAAGTTGTGAGAACAAGAGGCTAAGTGAAACATTGACCAACATGTGTGAGAATTATGAGGCTATGCAAAATAAATTGAGCCAATTGATGAATCAAAATTTTGAACACCAAACACAACAATCAAGGAAGAGAAAAGTTGAGAGTGAAAATTGCATCAATATGTTTGGTACTATTAGAGGCATTAATATTATTAATAATAATGAGTGCAGCATTGTTACTGATGAAGAATCATTAATCAAAAGGCCATGTAGGGATATTTCCTCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTTACTAGAGATAACCCCTCTCCTAGAGCTTATTTTAGGTGCTCCTTTTCTCCAAGCTGCCCAGTCAAAAAGAAGGTGCAAAAAAGTTTAGAAGACCCTACTATACTAGTTGCAACATATGAAGGAGAGCACAACCATGGTCATGAGAAAGCTGAAATATCAATGATATCAACCCAAAGTGAAGAAGCTCCATTAGGTTCAGTTCATGTTTCTTCACCTAAACAATTTATTCAAAGGACTTGTCCAACTAAGAAGCTTGACTTGGTTGACAATGTTCCAAAATCATCTATCCAACAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAATGATCCCAATTTCACTGCAGCACTTGCCACAGCTATTTCAGGAAGAATTTTGGACCATACTTCTAATAAGGCCAAATGGTGA 864 0.3634 MESTCVDTSLNLNINVPSILKDEVLVEELHRLSCENKRLSETLTNMCENYEAMQNKLSQLMNQNFEHQTQQSRKRKVESENCINMFGTIRGINIINNNECSIVTDEESLIKRPCRDISSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFSPSCPVKKKVQKSLEDPTILVATYEGEHNHGHEKAEISMISTQSEEAPLGSVHVSSPKQFIQRTCPTKKLDLVDNVPKSSIQQFLVQQMATSLTNDPNFTAALATAISGRILDHTSNKAKW* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5625 287 ProSiteProfiles WRKY domain profile. 133 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g5625 287 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 281 - -
Mal1g5625 287 Gene3D WRKY domain 122 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g5625 287 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g5625 287 Coils Coil 36 70 - -
Mal1g5625 287 SUPERFAMILY WRKY DNA-binding domain 135 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g5625 287 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 281 IPR044810 GO:0003700
Mal1g5625 287 SMART WRKY_cls 138 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5625 Mal-Chr1 132230126 132232478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5625 3 281 WRKY Transcription Factor Family AT1G80840 42.395 1.90e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal1g5625 WRKY 2.5e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5625 1 132230126 132232478 Mal2g0946 2 11048958 11052341 PCT