Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5623 ATGGCATTGTTCCGTAAGTTCTTCTATAAAAAACCCCCTGATGGGCTTCTTGAAATTACTGAAAGGGTTTATGTCTTCGATTATTGCTTTACCACGGATGTTATGGACGAAGACGAATACAAAGTATATATAGGAGGAATAATTAGGCAAATTCGCGAGCACTTCCCCGACGCTTCATTTATGGTGTTCAACATGAGGGAGGGAGAAAACCAAAGCCATATATCAAACATTTTGTGTGACTATGACATGACCGTGATGGACTATCCTAGGCAGTATGAAGGTTGTCCATTACTTACCATGGAGATGATCCATCATTTCTTAAGATCAGGTGAAAATTGGCTACAACTCGGGCATCAAAATATCGTTTTGATGCATTGCGAACGAGGTGGGTGGCCGGTTTTAGCGTTTATGCTGGCTGCACTATTGATCTATAGAAAATTGTATACAGGGGAGCAGAAAACACTTGACATGATATATAAGCAAGCGCCTCGGGAACTTTTACAGTTGATGTCACCGTTGAATCCATTACCTTCACAATTGAGGTATCTTCAGTACATATCAAGAAGAAATGTTGGTTCGGAATGGCCTCCTCTGGATAGAGCACTTACATTGGACTGCGTAATTATAAGACAAATTCCTAATATGGATGGAGAGGGTGGTTGTCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCGAATCGGAGTCCCAAAGTTCTCTTTTCTACTCCGAAAAGGAGCAAACTTGTTCGGCACTATAAACAGGCTGATTGTGAACTTGTTAAGATTGACATCCATTGTCATGTTCAAGGCGACGTTGTACTTGAGTGTATTAGTTTGGACAGTGACGTGGAACGTGAACAAATGATGTTCCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGATGAAGTTGATATGTTATGGAATACTAAGGATCACTTCCCTAAAACTTTTAGAGTAGAGGTTCTTTTCTCAGATATGGAGGCTTCTTCATCTTCTGTTATTTCAATCGATCTTCCTCGTATTGAGGAGAAAGAAGGTTTACCTGTTGAAGCATTTGCTAAGGTTAAGGAAATTTTCAGCAATGTTGAGTGGCTCGATTCGAAGTCAGATGTAGCAAATATGCTCCAACAGATCACAGCATCAAATATCCTTCTAGAAAGATTGGACAGTGGAGCTTCTGCTTCAACAAGCACCTTGCTAAACGAGTCATTTTCTGGAAGATTAAAATTTGACTCGAAGACACCAAACAAAACAAACAGTCTCAAATCTTCTGTTCACAAGGAACTTTCCGTGTCTCCATTGCAATTATCTGAGGATGATCCTATGGATAAAAAGATTGAACCATTAAAAATTGAGGAATTGTCAGAAGAGAAAATCAAGACTCCTGCAAGTTTAGGTCAAGCGAGCAAACCTATTCCTCCATTTGATCTGTCAAAAGACTCAGATTCTACTAAAAAGGAGACCGAATCATCAGAACCAAAAAAGTCACTGGAAAATGATCCTGAATTTCCTGCTTCTACGGCTCAGGTGGAACAATCTATCCCCTTAATTGAACCATCAGATGCAGATTCTAAGAAAAAGAAGACTGGATCATTGGAATCTGATGATAAGAATACTGAATCATTAGCATCAAAGGCGGTATTGGAAAATGACACCATGTTTCCTGCATCTGAATCTTCTACTAATGCAAGTTCTATGAAAAATCTTGGACTGTTAGGATCAAAAGAAAAGGAGATTGAATCATTAGACTCAGAGGCACTGCCGGAAAAGGATAGCATAGTTAAATTTGAACCAAAGACACTGCCGGAAGTTAATATAAAAACTCCAAAATCTGCAGATCAAGAAAAATTTTCAGTGTCCTCATTTGAATCAATTGGGGATGCTACAATGGAAAAGAAGAAAGAAGCTTTAGGTTTAACGGCGTCACCAGAAAATGACATCAAGACTCCTGCACCAACAGATTCAAATCCTACTGAAATGAAGATTGAATCATTAGAATCAAAGGCAACGGTGGCAAATGATACCAAGTTTCCTATGTCTCCGGTTCAAGCGAAACAATCCATTCCTTTAGTTGAACCATCCACAACAGCAAATTCAATGGAAAAGATGATGGAGAAATTAGAGTCAAAGGAAAAGGATATTGAATCGTTAGAATCAAAGTCATTGTTGGAAAATGATACCAAGGGGGAACAATCGGTTCCTCTAATTCAAACATCGACGGATGCAAGTTCAATGAAAACGGTGACTGGGAAGTCAGAATCAACGGTGTTGTCAGAAACTGATATCAGGAGTCCAACATCCAAGGTCGACAATAAACAAATTAGTCCCTTACTTGAACCCTCCGTTGATGCAAAATCAATTAAAAAGAAGATTGACCCTCAACAATTGCAGGTTTCATTTCAGCTACCAACCCAATCTAAAATAATTTCTCCACGGATACATCAAGCTATTCGACCGGCTTCAGCTTCTTATTCTTCTAACTCCTTGCCAGGTTCGCCTGTAGCTATCTCAAGATTTCAAAGTGCACCATCAGCTCTCGGAATAACAACTGTGTTGCAAGATCATACACCAATGGATATCAAAGAAGAAGTCACTCATGCAGTGTCCATATCTCCTCCTTCAGACTCAAAGGTGCCAAAGTCGGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCATCACCAAAATTGCTTCCATCTTCGCCGTTGAAGTCTTCAGACTCAAAGGTGCCAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCATCACCGGAATTGCTTCCATCTTCGCCGTTGAAGTCTTCAGACTCAAAGGCGTCAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCATCATCACCACCGGAATTGCTTCCATCTTCACCGTTGAAGTCTTCAGACTCAAAGGTGCCAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCATCATCACCGGAATTGCTTCCATCTTCGCCATTAAAGTCATCAGTGGATCCTCTTGCTTCCATGGAAAAGACCTTTAAAACCATTGTTCCTATTCCTCCATCTCCTCAGCAAAGTGAAAATTCAATGCATGATACAAATCAGATATCATCGGCTATTCCTCCTCCCACTCCTCCTCCGTTCCTTCCTGAAACATCTTTTTCCACTGTAAAAGAGTCATCGAAAAGTCCTCCTCCTCACCCACCACCTCCACCACCACCTCCATCTTCAACCGGACAAACTTCATCACCTTCAATACCTCCTCCTCCACTTCCTCCTCCACGGAGTATGAACAACTCTGTTGTTATGTCTGGTCCTCCTCCTCCACCTCCACCACCAAGACAACCTGGCACCACACCTGGTTCCACTTCTGCACCATTAGCGCCGCCACCACCTCCTCCACCTGCTTTTGCAACCCAAAATTCTCTGTCTAAAGGCCCTGCAAATGTTCCACCCGTACCTCCACCACCTTCCCCTTCTGCCAATGGATTATCAAATTCTGGCACTGCCTCACCACAGTCTCGTGCAATTCCCGGGCCACCTGGAAATGCACCTCCAATTCCTGGACCACCTGGGAATGTGCCTCCAATTCCCGGTCCACCTTCCGGAGCATTTGGCACAAAGGGACGCGGATTACTACGAACTAATGCTAAAACTCAAACTAAAAGAAGCAACCTGAAACCTTACCATTGGTTAAAGTTAACAAGGGCCATGCATGGTAGCTTGTGGGCTGAGACACAGAAACTTGATGAAGCTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGACTCTTTTCTCTGCAGCTACTCCAAGTTCTACTGAAAAAGGAGGAAAATCAAATCGCCGTGGCTCAGGCCAAAAACCTGACAAAGTTCAATTAATTGAACTCAGGCGGGCTTATAACTGTGAGATTATGCTTACAAAAGTTAAAATCCCACTGCCTGATTTAATGGGTCATGTTCTCGCATTGGACGATTCCGTGTTATATGTTGATCAGGTTGAGAACCTCATAAAGTTCTGTCCGACTAAAGAAGAGATGGACCAGCTCAAGGCATACACTGGAGATAAGGAAAATTTGGGGAAGTGTGAACAGTTCTTCTTAGAATTAATGAAAGTTCCAAGAGTGGAAAGCAAGCTAAGAGTTTTCTGTTTTAAGATGCAATTCTGCTCCCAGGTTTCAGAACTCAAAAGGGACTTGAATATCGTAAATTCTGCATCTGAAGAGATAAGGGATTCCGTCAAATTGAAAAGAATCATGCAGACCATTCTTTCTCTTGGCAATGCTTTGAATCATGGAACTGCAAGAGGTTCTGCTGTTGGGTTCCGTTTGGATAGTCTTCTTAAACTCACTGATACACGAGCCCGAAACAACAAAATGACCCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCGGAACTTTTAGATTTCTCCAAAGACCTAGTCAGTTTGGAGGCTTCATCAAAGATACAATTGAAATATTTGGCAGAAGAAATGCAAGCTATCAGTAAAGGACTGGAGAAAGTAATTCAAGAACTGTCTGCATCAGAGAATGATGGACCCGTGTCAGAAACCTTCTGCCAGATTCTGAAAGAATTTCTTAGTAATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAGCTTTATGCCAATGTGGGTAGAAACGCAGATGCATTAGCGCTATACTTCGGAGAAGATCCGGCACGTTGCCCATTTGAACAAGTTGTATCTACTCTGCTGAACTTTGTGAGGATGTTCATCCGAGCACACGACGAAAATTGCAAGCAGATTGAATATGAAAAAAAGAAAGCAGACAAGGAAGCAGCAGAAAATGAGAAGTCGAAGTTAGCTGCTAAAAATGAATCTGGACATATGATGAGGACCTCCATCAAGAGTGGTAATATTAAATAA 4977 0.4149 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMDEDEYKVYIGGIIRQIREHFPDASFMVFNMREGENQSHISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGHQNIVLMHCERGGWPVLAFMLAALLIYRKLYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRQIPNMDGEGGCRPIFRIYGQDPFIPANRSPKVLFSTPKRSKLVRHYKQADCELVKIDIHCHVQGDVVLECISLDSDVEREQMMFRVMFNTAFIRSNILMLNRDEVDMLWNTKDHFPKTFRVEVLFSDMEASSSSVISIDLPRIEEKEGLPVEAFAKVKEIFSNVEWLDSKSDVANMLQQITASNILLERLDSGASASTSTLLNESFSGRLKFDSKTPNKTNSLKSSVHKELSVSPLQLSEDDPMDKKIEPLKIEELSEEKIKTPASLGQASKPIPPFDLSKDSDSTKKETESSEPKKSLENDPEFPASTAQVEQSIPLIEPSDADSKKKKTGSLESDDKNTESLASKAVLENDTMFPASESSTNASSMKNLGLLGSKEKEIESLDSEALPEKDSIVKFEPKTLPEVNIKTPKSADQEKFSVSSFESIGDATMEKKKEALGLTASPENDIKTPAPTDSNPTEMKIESLESKATVANDTKFPMSPVQAKQSIPLVEPSTTANSMEKMMEKLESKEKDIESLESKSLLENDTKGEQSVPLIQTSTDASSMKTVTGKSESTVLSETDIRSPTSKVDNKQISPLLEPSVDAKSIKKKIDPQQLQVSFQLPTQSKIISPRIHQAIRPASASYSSNSLPGSPVAISRFQSAPSALGITTVLQDHTPMDIKEEVTHAVSISPPSDSKVPKSVEPCSTSIPTTSSSPKLLPSSPLKSSDSKVPKSVEPCSTSIPTTSSSPELLPSSPLKSSDSKASKSVEPCSTSIPTTSSSSPPELLPSSPLKSSDSKVPKSVEPCSTSIPTTSSSSPELLPSSPLKSSVDPLASMEKTFKTIVPIPPSPQQSENSMHDTNQISSAIPPPTPPPFLPETSFSTVKESSKSPPPHPPPPPPPPSSTGQTSSPSIPPPPLPPPRSMNNSVVMSGPPPPPPPPRQPGTTPGSTSAPLAPPPPPPPAFATQNSLSKGPANVPPVPPPPSPSANGLSNSGTASPQSRAIPGPPGNAPPIPGPPGNVPPIPGPPSGAFGTKGRGLLRTNAKTQTKRSNLKPYHWLKLTRAMHGSLWAETQKLDEACRAPEFDMSELETLFSAATPSSTEKGGKSNRRGSGQKPDKVQLIELRRAYNCEIMLTKVKIPLPDLMGHVLALDDSVLYVDQVENLIKFCPTKEEMDQLKAYTGDKENLGKCEQFFLELMKVPRVESKLRVFCFKMQFCSQVSELKRDLNIVNSASEEIRDSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLVSLEASSKIQLKYLAEEMQAISKGLEKVIQELSASENDGPVSETFCQILKEFLSNAEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFIRAHDENCKQIEYEKKKADKEAAENEKSKLAAKNESGHMMRTSIKSGNIK* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5623 1658 MobiDBLite consensus disorder prediction 423 580 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1286 1309 - -
Mal1g5623 1658 Pfam Formin Homology 2 Domain 1237 1608 IPR015425 -
Mal1g5623 1658 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1235 1634 IPR015425 -
Mal1g5623 1658 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Mal1g5623 1658 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Mal1g5623 1658 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Mal1g5623 1658 SMART it6_source 906 1656 IPR015425 -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1037 1057 - -
Mal1g5623 1658 Coils Coil 709 732 - -
Mal1g5623 1658 Gene3D Formin, FH2 domain 1254 1647 IPR042201 -
Mal1g5623 1658 PANTHER FORMIN-J 687 941 - -
Mal1g5623 1658 PANTHER FORMIN-J 971 1651 - -
Mal1g5623 1658 PANTHER FORMIN-J 1 670 - -
Mal1g5623 1658 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 881 1022 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 423 443 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 717 737 - -
Mal1g5623 1658 SMART PTEN_C2_2 197 337 IPR014020 -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1081 1115 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 565 580 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 450 471 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 532 554 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1626 1658 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 648 672 - -
Mal1g5623 1658 Coils Coil 1609 1643 - -
Mal1g5623 1658 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1309 1635 - -
Mal1g5623 1658 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Mal1g5623 1658 PRINTS Proline rich extensin signature 1087 1112 - -
Mal1g5623 1658 PRINTS Proline rich extensin signature 921 937 - -
Mal1g5623 1658 PRINTS Proline rich extensin signature 1061 1078 - -
Mal1g5623 1658 PRINTS Proline rich extensin signature 900 912 - -
Mal1g5623 1658 PRINTS Proline rich extensin signature 1121 1133 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 658 672 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 491 511 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 690 709 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 738 786 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1286 1300 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1626 1642 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1181 1195 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1197 1221 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 879 1243 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 717 789 - -
Mal1g5623 1658 MobiDBLite consensus disorder prediction 1122 1157 - -
Mal1g5623 1658 Gene3D - 196 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5623 Mal-Chr1 132199102 132210043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5623 795 867 FH2 protein (formin) Gene Family AT2G25050 48.000 9.34e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5623 - - cam:101501499 1342.02