Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5604 ATGGGAACAAATCTAAGCATTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACAATCTTAGATATGGTTTATCATCTATGCAAGCGCATCTTGATGTAGATAAATCCACTTCGTTTTTTGGCGTTTATGATGGTCATGGAGGTAAGGCAGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAACAGGTGCTCAAGAGTGAAGAATACGTAGCCGGAGATGTTGGAACATCACTTCAGAAAACATTTTTAAGAATGGACGAGATGATGCGTGGTCAGAGGGGATGGAGGGAATTAGCAGTCTTGGGTGATAAGGTAAAAGGGTTCAATGGAATGATTGAAGGATTGATTCGGTCCCCAAGAAGCAGTGATAATAAGGACCAAAGTGATGACTGGGCCTTCGAGAAGGGGCCTCATTCTGATTTTGATGGACCAACTTCAGGAAGTACTGCCTGTGTCGCAATCATTAGAAACAACCTACTTTTTGTTGCGAATGCTGGTGATTCACGCTGCGTAATATCTAGGAATGGTCAGGCATACAATTTATCTAGAGATCACAAGCCTGAACTTGCGATTGAGAAGGAAAGAATCTATAAAGCTGGTGGTTTTATTCATGCAGGACGAGTTAATGGGAGTTTAAATCTTGCAAGAGCTATAGGTGACGTGGACTTTAAGAATAATAGATTTCTTTCTGCTGAAAAACAAGTTGTCACCGCCAATCCAGACATAAACATTGTTGACCTTCGTGACGAAGATGAATTTATAGTGATAGCTTGTGATGGCATATGGGATTGCCTGTCAAGCCAACAATTGGTAGATTTTGTACGTCAAGAACTTCTTTCTGAAACCAAACTTTCTGATGTTTGTGAAAGAGTGCTAGACCGGTGTTTGGCGCCATCTTTGGCTGTTGGTGATGGATGTGATAACATGACAATGATCTTGGTACAGTTCAAAAAACCACTGCAGACCAGTGCACCAGCTCAAGAACAATCATCTTCAAATGAACAAGGTGCATCTGAACCAACATTGGAGAACAGTTGA 1044 0.4109 MGTNLSIPKTEKFSEDGENDNLRYGLSSMQAHLDVDKSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKSEEYVAGDVGTSLQKTFLRMDEMMRGQRGWRELAVLGDKVKGFNGMIEGLIRSPRSSDNKDQSDDWAFEKGPHSDFDGPTSGSTACVAIIRNNLLFVANAGDSRCVISRNGQAYNLSRDHKPELAIEKERIYKAGGFIHAGRVNGSLNLARAIGDVDFKNNRFLSAEKQVVTANPDINIVDLRDEDEFIVIACDGIWDCLSSQQLVDFVRQELLSETKLSDVCERVLDRCLAPSLAVGDGCDNMTMILVQFKKPLQTSAPAQEQSSSNEQGASEPTLENS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5604 347 ProSiteProfiles PPM-type phosphatase domain profile. 23 318 IPR001932 -
Mal1g5604 347 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 330 - -
Mal1g5604 347 ProSitePatterns PPM-type phosphatase domain signature. 41 49 IPR000222 GO:0043169
Mal1g5604 347 MobiDBLite consensus disorder prediction 121 139 - -
Mal1g5604 347 SUPERFAMILY PP2C-like 4 319 IPR036457 -
Mal1g5604 347 Pfam Protein phosphatase 2C 31 93 IPR001932 -
Mal1g5604 347 Pfam Protein phosphatase 2C 126 300 IPR001932 -
Mal1g5604 347 MobiDBLite consensus disorder prediction 324 347 - -
Mal1g5604 347 PANTHER PROTEIN PHOSPHATASE 2C 1 330 IPR015655 GO:0004722|GO:0006470
Mal1g5604 347 CDD PP2Cc 23 318 IPR001932 -
Mal1g5604 347 Gene3D - 1 319 IPR036457 -
Mal1g5604 347 SMART PP2C_4 13 316 IPR001932 -
Mal1g5604 347 MobiDBLite consensus disorder prediction 118 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5604 Mal-Chr1 131899748 131904529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5604 1 321 PP2C-type Phosphatase Gene Family AT2G25070 71.687 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5604 K17499 - gmx:100793667 545.814