Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5600 ATGTTAAATTCTCCTTCATCTTGTTCCTCAAACATCATTAACCACTCCAAAAAAATCCTTGTTCTTCTTTCACTACTCCTTCTTCTTTCTTACCTTCCAAAATCAAACTCACTTTTCTTCAACATAACAAATTTTGATGATCCAGCAGTTGCATCAAACATGTCATACCAAGGTGATGGAAAATCCACCAATGGTTCCATTGATCTCAACAAAGTAAGTTACCTTTTCCGTGTAGGAAGAGCATTCTATTCACAACCTTTACATTTATGGGACAAAAAAACCAACACTCTCACAAGTTTCACTACACGTTTTTCCTTTACCATTGATAAACTAAATGACACTTCCTATGGTGATGGTTTTGTGTTTTATTTAGCTCCTTTAGGATATCAAATACCACCTAATTCAGCTGGTGGTGTTTTTGGTATTTTTAATGCTACTACTAATAGTAACTTTGTTATGAACTATGTTGTTGCTGTTGAGTTTGATACTTTTGTTGGTTCCACTGATCCACCAATGAAACATGTTGGTATTGATGATAATGCTTTGACTTCTGTTGCTTTTGGGAAATTTGATATTGATAATAATCTTGGTAGGGTTTGTTATGTTTTGATTGATTATAGTTCTGATGCAAAGATGTTAGAGGTTTTTTGGTCTTTTAAGGGAAGGATTGTGAAAGGTGATGGAAGTTATGGGAATAATTCACTTTCTTATCAGATTGATTTTATGAAAAAGTTGCCTGAATTTGTTAATATTGGATTTTCGGCTTCAACGGGTCTTTCTACCGAAAGTAATGTTATTCATTCGTGGGAGTTTAGTTCGAATCTGGAGGATTCGAACTCTACCGCGATTTTGTTGGAGGGAAATGAAGGAAAAGGGTCGTTGAAAACGGTTATTATTGTTGTTGCGGTGATTGTTCCGGTTATTTTGGTATTTTTGATAGCCAGTGTTGTTGGTTGGGTGATAGTGAAGAGGAAAAGGAAAAATTGTGATGAAGAATTGGATGAATTTGGAGGACCGGTTTCGAAGAAATTTGATTTGGATAAAGGAACAATACCTAGAAGATTTGAATATAGTGAATTAGCTGCTGCTACTAATGATTTTGCTGATGATAGATTGCTTGGTAGAGGAGGGTTTGGACAAGTTTACAAAGGTGCCTTGAGTTATTTAGGTAGGGTTGTTGCTGTGAAGAGGATTTCCGCCGATTTTGAGAATTCAGAAAGAGTTTTCATCAATGAGGTTAGGATTATAAGCCGTTTGATACATAGAAACTTGGTTCAATTCATAGGTTGGTGTCATGAACAAGGTGAGTTTCTTTTGGTTTTTGAGTACATGCCTAATGGAAGCCTTGACACACATTTGTTTGGTGACAAGAGAAGTTTGGCTTGGGAAGTTAGGTACAAGGTTGCATTAGGCGTTGCGAATGCACTTCGTTATCTTCACGATGACGCCGAGCAATGTGTTCTTCATAGAGATATTAAGTCAGCTAATGTGTTGTTGGACACTGATTTCAGCACAAAGCTCGGCGATTTCGGGATGGCGAAATTTTATGATCCAATGTTGAGGACACAAAGAACAGGTGTGGTTGGAACATATGGTTATTTAGCGCCTGAATATATCAATGGAGGAAGGGCTAGTAAAGAATCTGATATGTATAGTTTTGGGATTGTTGCTTTGGAGCTAGCAACTGGGAGAAGGGTTTTTCAAGATGGTGATTTTCATGTGCCTTTGATGAATTGGGTTTGGGGACTTTATGTGGAAGGAAATCTTATGAGTGCTGCTGATGAAAGATTGAATATGGAGTTTGATGTTAGTGAAATGAAGAGTTTGCTTATTGTAGGTTTATGGTGCACTCATTCAAATGATAAAGAGAGGCCTAAAGCTTATGAGGTAATTAAGGTTCTTCAACTTGAAATGGCATTACCTGAACTTCCACTTGATATGCATGATCATGCTCCTCCTATTGTAACTTTTAGGCAATCCAATGGTCCCTCAATGGCACCACCTATGACTAATAGTCTTGTTACTTCTGGAAGATAG 2037 0.3716 MLNSPSSCSSNIINHSKKILVLLSLLLLLSYLPKSNSLFFNITNFDDPAVASNMSYQGDGKSTNGSIDLNKVSYLFRVGRAFYSQPLHLWDKKTNTLTSFTTRFSFTIDKLNDTSYGDGFVFYLAPLGYQIPPNSAGGVFGIFNATTNSNFVMNYVVAVEFDTFVGSTDPPMKHVGIDDNALTSVAFGKFDIDNNLGRVCYVLIDYSSDAKMLEVFWSFKGRIVKGDGSYGNNSLSYQIDFMKKLPEFVNIGFSASTGLSTESNVIHSWEFSSNLEDSNSTAILLEGNEGKGSLKTVIIVVAVIVPVILVFLIASVVGWVIVKRKRKNCDEELDEFGGPVSKKFDLDKGTIPRRFEYSELAAATNDFADDRLLGRGGFGQVYKGALSYLGRVVAVKRISADFENSERVFINEVRIISRLIHRNLVQFIGWCHEQGEFLLVFEYMPNGSLDTHLFGDKRSLAWEVRYKVALGVANALRYLHDDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKFYDPMLRTQRTGVVGTYGYLAPEYINGGRASKESDMYSFGIVALELATGRRVFQDGDFHVPLMNWVWGLYVEGNLMSAADERLNMEFDVSEMKSLLIVGLWCTHSNDKERPKAYEVIKVLQLEMALPELPLDMHDHAPPIVTFRQSNGPSMAPPMTNSLVTSGR* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5600 678 Gene3D Phosphorylase Kinase; domain 1 352 443 - -
Mal1g5600 678 Gene3D - 35 285 - -
Mal1g5600 678 CDD STKc_IRAK 373 635 - -
Mal1g5600 678 ProSitePatterns Legume lectins beta-chain signature. 157 163 IPR019825 -
Mal1g5600 678 PANTHER - 21 650 - -
Mal1g5600 678 CDD lectin_legume_LecRK_Arcelin_ConA 40 275 IPR001220 GO:0030246
Mal1g5600 678 Pfam Legume lectin domain 39 280 IPR001220 GO:0030246
Mal1g5600 678 PANTHER PUTATIVE-RELATED 21 650 - -
Mal1g5600 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 276 IPR013320 -
Mal1g5600 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Mal1g5600 678 SMART serkin_6 367 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5600 678 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Mal1g5600 678 ProSitePatterns Legume lectins alpha-chain signature. 245 254 IPR000985 -
Mal1g5600 678 Pfam Protein kinase domain 368 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5600 678 ProSiteProfiles Protein kinase domain profile. 367 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5600 678 SUPERFAMILY Protein kinase-like (PK-like) 351 650 IPR011009 -
Mal1g5600 678 Gene3D Transferase(Phosphotransferase) domain 1 444 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5600 Mal-Chr1 131870948 131872984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5600 20 658 Receptor kinase-like Gene Family AT5G10530 44.992 6.42e-179 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal1g5600 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5600 - - gmx:100791220 888.256