Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5591 ATGGCAAATTATCACCGGAACAACGTTGGAAACCTCGTTCTCGGCCACCGCCACCACCACCACCACCACTCCACCAAAACACCAACATTCTCTAACCACTTCCGTCTCTGGAACTCTCTCTCCATCGCCTCCCTCCGTCGCCTCATCTTCCACGCCGTCAGTTGCGGCGGTGCCAGCTCCCGTTACAATCACCGCCGTCGCACCACCTTCGACAACAATGACACAGACGAATTCTCTTCCACAACAAGATCCAACTCTTCTTCCTTCCGCAAACCGAATGTGAAGTCGGAGAAACTCTCCGATCTTCTGAACATGGCGGAGATGGAGACAGAAGCGGAGGCGAAGAAGAAGGAAGAAGCTCTAGAGGAACTGAAGAAACTCGTGAAGGATTTGCATGAGGAAGATGATTCGGTGAAGCGGCGAGAAGCTGCAACCACCGTGAGAATGCTTGCTAAGGAGAATTTGGAAGTTAGAGGAACGCTTGCTATGCTCGGAGCGATTCCACCGTTAGTCACAATGCTCGATTCGCAAGACGTTGATTCTCAGATCGCTTCTCTCTATGCTTTGCTCAATCTCGGAATCGGAAACGATGCAAATAAAGCAGCCATTGTTAAAGTTGGTTCTGTTCACAAGATGCTTAAGCTTATTGAATCATCAGATGGTATTGATTCTGCGGTTTCTGAAGCCATTGTTGCGAATTTCCTTGGATTAAGTGCTTTGGATTCGAATAAACCGATAATTGGGTCTTCTGCTGCAATACCCTTTTTAGTTAGAACCCTTCAAAATAAGAATTTAGATAAGAAAAGTAGAAATCAAGTTAAGCAAGATGCTCTTAGAGCACTTTACAATCTTTCAATCTTCCAAGCAAATGTTTCATTCATTTTGGAAACCGATTTGGTACCGTTTCTGATAAACTCGATTGGAGATATGGAAGTAACTGAAAGAAACCTCTCAATCCTTAGCAACTTGGTATCGAGTAGAGCGGGTAGAAAAGCGATAAGTAGTGTCCCTGATGTGTTTCCTATCTTGGTGGATGTGTTGAATTGGAATGATTCACCTGAATGTCAGGAAAAGGTTTCATATGTTTTGATGGTTATGTCGCATAAATCTTATGGTGACAAGCAGGCCATGATTGAGGCAGGGATTGTGTCGTCGCTTCTTGAGTTATCGCTTATTGGTACTACGTTGACTCAGAAACGGGCATCAAGGCTATTGGAAAGTTTGAGAATAGATAAAGGGAAACAGGTTTCAGGGAACTATGGCGGAAATTTAGGCGCAACTGTCTCTGCTCCAATATGCGGAACTTCATCATCATGTGTAAAACCAGATGGAGGAGGAGGAGGAAAAGAGTGCTCGGAAGAAGATGAAGACATGATGAGCGAAGAGAAGAAAGCGGTGAAGCAATTAGTCCAATTGAGTTTGCAAAACAACATGAGAAAAATAGTGAAGAGGGCTAACTTGCCGCAAGACATCGTTCCATCAGATCATTTCAAGTCACTCACTTCAAGTTCAACTTCAAAGAGTTTACCATTCTGA 1536 0.4421 MANYHRNNVGNLVLGHRHHHHHHSTKTPTFSNHFRLWNSLSIASLRRLIFHAVSCGGASSRYNHRRRTTFDNNDTDEFSSTTRSNSSSFRKPNVKSEKLSDLLNMAEMETEAEAKKKEEALEELKKLVKDLHEEDDSVKRREAATTVRMLAKENLEVRGTLAMLGAIPPLVTMLDSQDVDSQIASLYALLNLGIGNDANKAAIVKVGSVHKMLKLIESSDGIDSAVSEAIVANFLGLSALDSNKPIIGSSAAIPFLVRTLQNKNLDKKSRNQVKQDALRALYNLSIFQANVSFILETDLVPFLINSIGDMEVTERNLSILSNLVSSRAGRKAISSVPDVFPILVDVLNWNDSPECQEKVSYVLMVMSHKSYGDKQAMIEAGIVSSLLELSLIGTTLTQKRASRLLESLRIDKGKQVSGNYGGNLGATVSAPICGTSSSCVKPDGGGGGKECSEEDEDMMSEEKKAVKQLVQLSLQNNMRKIVKRANLPQDIVPSDHFKSLTSSSTSKSLPF* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5591 511 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 165 207 IPR000225 GO:0005515
Mal1g5591 511 Coils Coil 103 141 - -
Mal1g5591 511 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 251 285 IPR000225 GO:0005515
Mal1g5591 511 MobiDBLite consensus disorder prediction 66 93 - -
Mal1g5591 511 Pfam Armadillo/beta-catenin-like repeat 160 192 IPR000225 GO:0005515
Mal1g5591 511 Gene3D - 268 419 IPR011989 -
Mal1g5591 511 MobiDBLite consensus disorder prediction 447 462 - -
Mal1g5591 511 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 511 - -
Mal1g5591 511 SMART arm_5 240 286 IPR000225 GO:0005515
Mal1g5591 511 SMART arm_5 369 410 IPR000225 GO:0005515
Mal1g5591 511 SMART arm_5 287 325 IPR000225 GO:0005515
Mal1g5591 511 SMART arm_5 154 194 IPR000225 GO:0005515
Mal1g5591 511 SMART arm_5 196 239 IPR000225 GO:0005515
Mal1g5591 511 MobiDBLite consensus disorder prediction 439 462 - -
Mal1g5591 511 SUPERFAMILY ARM repeat 118 411 IPR016024 -
Mal1g5591 511 MobiDBLite consensus disorder prediction 492 511 - -
Mal1g5591 511 Gene3D - 63 267 IPR011989 -
Mal1g5591 511 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 511 - -
Mal1g5591 511 MobiDBLite consensus disorder prediction 495 511 - -
Mal1g5591 511 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5591 Mal-Chr1 131734095 131736128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5591 121 415 U-box Gene Family AT1G67530 30.464 1.58e-31 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5591 1 131734095 131736128 Mal2g0941 2 10960276 10963688 PCT