Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5586 ATGAATGATCAGTTTCCTATTGGAATGCGGGTTCTTGCTGTTGATGATGATAGAACATGTCTCAAGATTTTGGAGAGACTTCTCCAAAGGTGTCAATACCATGTAACCACTGCTCAAAGTGCACTAACAGCACTGAACATGTTGAGAGAAAACAAGAGCAATTTTGACCTAGTAATCAGCAATGTTCATATGCCAGACATGGATGGATTTAAGCTTCTTGAGCTTGTTGGACTTGAGATGGACTTACCTGTCATAATGTTTTCAGCAAACGATGATCCAAAGATGGTGATGAAAGGAATTGATCATGGTGCTTGTGATTATCTGCTGAAACCTGTTACATTGAAGGAGGTACAAATGATTTGGCAACATGTAGTCAGGAAGAAGAAAACTTGCAAAAGAAGCAATCGTGACGCGTCTAATTCTGATAGTGGAAATGTAATAGATTCAGCTGGGACGGGAAATTCTGGTCAAAATGAAAAGCCATCCAGGAAAAGGAAGGAGAAGAATGAAGATGATGTTGAGGAAGAGAATGAGGATGATTATGACAATGATGATTTGACGGCACAAAAGAAGCCTCGAGTTGTTTGGTCCACTGACTTACACCGCAAGTTTCTTGCTGCTGTTAATCAACTAGGCTTTGAAAAGGCTGTGCCAAAAAAGATTCTTGACTTGATGAATGATGAAAATCTTACAAGGGAAAATGTGGCCAGCCATCTCCAGAAATACAGACTCTATCTGAAAAAACAAAATGATATGCAGCAAGAATTGGGTAGTGATTCTGATAAATCCAATTCAAGAATGAGTTATCTCAGAGGAGTTGGAGGACATGTGCCATCAATGAATGACTCTAGACAGTTTCATAATCATAACAGTGCTTTCAGATCCTTTCCATCTAGCGGTATGAGTAGTAGATTGAACACTCCTGCTAGTGTGATCATCTTAAGTTTCAATCGTCCGTAG 960 0.3948 MNDQFPIGMRVLAVDDDRTCLKILERLLQRCQYHVTTAQSALTALNMLRENKSNFDLVISNVHMPDMDGFKLLELVGLEMDLPVIMFSANDDPKMVMKGIDHGACDYLLKPVTLKEVQMIWQHVVRKKKTCKRSNRDASNSDSGNVIDSAGTGNSGQNEKPSRKRKEKNEDDVEEENEDDYDNDDLTAQKKPRVVWSTDLHRKFLAAVNQLGFEKAVPKKILDLMNDENLTRENVASHLQKYRLYLKKQNDMQQELGSDSDKSNSRMSYLRGVGGHVPSMNDSRQFHNHNSAFRSFPSSGMSSRLNTPASVIILSFNRP* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5586 319 CDD REC_typeB_ARR-like 11 125 - -
Mal1g5586 319 PIRSF RR_ARR_type-B 1 313 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mal1g5586 319 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 262 IPR045279 GO:0009736
Mal1g5586 319 MobiDBLite consensus disorder prediction 131 186 - -
Mal1g5586 319 ProSiteProfiles Response regulatory domain profile. 10 125 IPR001789 GO:0000160
Mal1g5586 319 Gene3D - 8 143 - -
Mal1g5586 319 Pfam Response regulator receiver domain 11 117 IPR001789 GO:0000160
Mal1g5586 319 SMART REC_2 9 121 IPR001789 GO:0000160
Mal1g5586 319 SUPERFAMILY Homeodomain-like 189 248 IPR009057 -
Mal1g5586 319 Pfam Myb-like DNA-binding domain 193 243 IPR001005 -
Mal1g5586 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 247 IPR017930 -
Mal1g5586 319 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 191 244 IPR006447 GO:0003677
Mal1g5586 319 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 262 - -
Mal1g5586 319 SUPERFAMILY CheY-like 8 132 IPR011006 -
Mal1g5586 319 MobiDBLite consensus disorder prediction 137 158 - -
Mal1g5586 319 Gene3D - 187 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5586 Mal-Chr1 131581787 131584500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5586 3 319 Response Regulator Gene Family AT2G25180 58.438 3.04e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal1g5586 Response_reg 3.4e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5586 - K14491 mtr:MTR_1g013180 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5586 1 131581787 131584500 Mal2g0937 2 10891633 10895630 PCT