Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5574 ATGAAAATGAAGCTTCTTTTTATGTTTCCCATACTCTTCCTTATTCTTCACAAACCCATTTGGATTCTTGCTTCTGTAGACCCTCTTGTTCCCTCACCTCAAATTTCTCCAATTCTCACATCAATGACTGTGGCTGCTTCCTCTCCAGGTATTCATGAGGGAGATGAACATCAAAATATGGATTTACACAAGAAAAAGGTAATGGCTTTTGTAGCAGCTAGCACAGGACTTGGTGCTATAGTTTTGTGTGTGTTAATCTTCTGGATTTTTTACACAAAGTATGCTTCAAAATCCAACAAGAAAAACCTTCAAAACTCAGATGGTGAGAAAGGGCTTGGTTTAGCTCCATTTTTGAGTAAATTCAGTTCTGTGAAGATGGTTGGTAAGAAAGGGTGTGTTCCAATCATTGACTATAAGCAATTAGAAAAAGCCACTGGAAGTTTCAAGGAAAGTAACATCATAGGTGAGGGTGGTTTTGGATGTGTTTACAAGGCTAGGTTGGATGATAATTTGGATGTTGCCATCAAGAGGTTGAACTGTGAATGTCAGTATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTGCTGGGTTGTAGCAGTAATGAGGATTCAAGGTTTATTGTGTATGAGTTGATGCAAAATGGATCATTGGAAACTCAATTACACGGACCATCTCATGGCTCTGCATTGACTTGGCACATGAGAATGAAGATTGCTCTTGACACAGCAAGAGGCTTAAAATATCTGCATGAGCACTGCTACCCTGCAGTGATCCATAGAGATCTGAAATCTTCCAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCAATAACTGATGGGTCCCAAAACAAGAATAACATCAAGCTTTCAGGCACATTGGGGTACGTAGCACCAGAGTATCTTTTAGATGGCAAATTGACAGATAAAAGTGATGTCTATGCTTTTGGAGTTGTGCTTCTTGAGCTTCTATTAGGAAGAAAGCCTGTGGAAAAACTGACCCCATCTCAGTGCCAGTCTATTGTCACCTGGGCGATGCCACAGCTCACAGACAGATCCAAGCTTCCAAACATTGTGGATAATGTGATTAAGAATACAATGGATCCCAAGCACTTATATCAGGTTGCTGCTGTGGCTGTATTATGTGTGCAACCAGAGCCGTGTTACCGCCCTTTGATTGCAGATGTTCTACACTCCCTAATCCCTCTTGTACCTGTTGAGCTTGGAGGAACACTCAGAGTTTCACAAGTGACGCAGCAACCTGAGAATTCTAGTTAA 1332 0.4039 MKMKLLFMFPILFLILHKPIWILASVDPLVPSPQISPILTSMTVAASSPGIHEGDEHQNMDLHKKKVMAFVAASTGLGAIVLCVLIFWIFYTKYASKSNKKNLQNSDGEKGLGLAPFLSKFSSVKMVGKKGCVPIIDYKQLEKATGSFKESNIIGEGGFGCVYKARLDDNLDVAIKRLNCECQYAEREFENEVDLLSKIQHPNVISLLGCSSNEDSRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARGLKYLHEHCYPAVIHRDLKSSNILLDANFNAKLSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLTPSQCQSIVTWAMPQLTDRSKLPNIVDNVIKNTMDPKHLYQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQPENSS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5574 443 SMART serkin_6 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5574 443 ProSiteProfiles Protein kinase domain profile. 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5574 443 ProSitePatterns Protein kinases ATP-binding region signature. 154 176 IPR017441 GO:0005524
Mal1g5574 443 Gene3D Transferase(Phosphotransferase) domain 1 224 423 - -
Mal1g5574 443 PANTHER OS01G0750732 PROTEIN 36 439 - -
Mal1g5574 443 Gene3D Phosphorylase Kinase; domain 1 117 223 - -
Mal1g5574 443 CDD STKc_IRAK 154 421 - -
Mal1g5574 443 Pfam Protein tyrosine and serine/threonine kinase 151 387 IPR001245 GO:0004672|GO:0006468
Mal1g5574 443 PANTHER BNAA04G14780D PROTEIN 36 439 - -
Mal1g5574 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Mal1g5574 443 SUPERFAMILY Protein kinase-like (PK-like) 129 418 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5574 Mal-Chr1 131352341 131356536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5574 23 364 Receptor kinase-like Gene Family AT1G80640 47.414 1.92e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mal1g5574 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5574 - - gmx:100812044 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5574 1 131352341 131356536 Mal2g0929 2 10756329 10759328 PCT