Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5531 ATGAGAAACCACTGGTCTCTCTTCCATATTGTAAATACCCTATGGTTATGTTTGTGCATCCTACTTTTGTCTGAAGTAGTTTTGGTTTTGGCTGGTATTCAACGGATTGGAAAGATCTCACCTGGATTTGAAGGCTCTCAAATGAATTGGATTGATAAGAATGGGAAGTTTCTTGTGTCAAACAAACAACAGTATGGTTTTGGCTTTGTCACAACTTCAAATGACACCACATTGTTTCTACTTGCAATAGTCCACATGGATAGCACCAAAGTTATTTGGACTGCAAATAGAGAATTTCCTGTTTCTAATTCTGATAAGTTTGTGTTTGATGAAAAAGGTAATGCTTTTTTACAAAAAGGAAAACATTTGGTTTGGTCAACAAATACAACTGGTATGAAAGTTTCTTCAATGGAATTACAAGACAATGGAAATTTGGTTTTGCTTGGAAATGATAGTAAAGTCATTTGGCAAAGTTTTGATCGTCCAACAGATACTTTATTACCAATGCAAAACTTCACTAAGGGAATGAAACTTATCAGTGAACCTGATTCTAACAATTTCACCTATGTTCTTGAAATTGAATCTCATTCTGGTAATGTTATTCTTTCCACAGGTTTACAATCTCCACAAACTTATTGGTCTATGGAAAAAGATATCCGAAAAATCGTCAATGAAAACGGTGTCGAGGTAGCTTTTGCAACTCTTGATGCAAATTCATGGAAGTTCTATGACAAAAAAACATCATTGTTGTGGCAATTTATTTTTTCTGATGCTTCAAATGCAACTTGGATTGCAGTTTTAGGAAGTGATGGATTTATTACTTTCAACAATCTTCAAAATAAAGGATCAATTGGTTCATCAACAACAAGAATACCACAAGATTCTTGTAGTACACCACAACCTTGTGATCCTTACAATATATGCAATGGTGACAAAAAATGCTCTTGCCCTTCTGTTCTTAGCTCTAGTCATAGTTGCGAACCGGGTTTTGTTTCGCCTTGTAACTCGAAAAGTTCCATTGATCTCATTAAAGGTGATGATGGACTCAATTACTTTGCACTTGAATTTCTTCCACCTTCTTCGAAAACCGATTTGATTGGTTGCAAAAATTCTTGCAGTGAAAACTGCTCATGTCTTGCTATGTTCTTTCACAGCAGTTCAGGAAATTGTTACCTTTTAGATAGGATTGGAAGCTTTGTGAAAACTAATAATGATTCTGGTTTTGTCTCTTACATTAAAGTCTCAAGAGACGGAAGCACTGACACAGACACAAACACGGGGGAAAGTGGAAACAGGAATATGCAGACAATAGTTGTTGTGATCATTGTCATAGTAACATTGTTTGTCATTTCTGGCATGATCTATGTGGGACTAAAATACTCGAAGAAAAAGGAAAATATGCCCGAATCTCTGGTCGAGAATTCAGATGATGATGACGATTTTTTGAAGAGTTTAACTAGTATGCCGATCCGTTTCAGCTACAACGATCTAGAAACTGCGACGAATAACTTCTCGGTGAAGTTAGGTCAAGGTGGTTTCGGCTCGGTGTATAAAGGAATTCTACAAGATGAAACTCAAATAGCTGTGAAGAAATTGGAAGGAATTGGTCAAGGGAAGAAAGAATTTAAGGTTGAAGTAAGCACTATTGGAAGCATTCATCACAATCATTTGGTAAGGCTTAAAGGTTTTTGTGCTCAAGGATCTCATAAACTTCTTGTTTATGAATATATGGAGAATGGTTCATTGGATAAATGGATATTCAAAAAAAATAAAGAATTATCTTTGGATTGGAACACAAGGTACAAAATTGCACTAGGAACAGCTAAAGGACTAGCTTATTTGCATGAAGATTGTGACTCAAAGATTGTTCATTGTGATATTAAACCAGAAAATGTGCTTTTAGATGATAATTTTGAAGCCAAAGTTTCCGATTTCGGTCTCGCGAAGCTCATGAACCGCGAACAAAGTCATGTTTTTACAACAATGAGAGGAACAAGAGGTTATTTAGCACCAGAATGGATCACAAACTATGCTATATCAGAGAAAAGTGATGTTTATAGCTACGGAATGGTGTTGTTAGAGATTATTGGAGGAAGGAAAAACTATGATCCTAATGAAAATTCGGAGAAATCACATTTTCCTTCTTTTGCTTATAAAATGGTGGAACAAGGGAAGGTGGAAGATTTAATTGATTCAGAGTTGAAAATGTGTGAAAATGATGTGAGAGTTGAGATTGCTTTGAATGTTGCATTTTGGTGTATACAAGAAAATATGTGTTTGAGGCCTTCTATGAATAAAGTTGTACAAATGCTTGAGGGTCTATGTGATGTTCCTAAGGTACCAAATGGGTCTCCATTAGGTTCTAAATTTTATTTAAATTTGCTTAGACCAACAAGTGAGAGTGGCACTTCTTCAGAACCAACAGAGGGGAATAGTGATGCATATCTCTCTGCCGTTAGACTTTCAGGGCCAAGATAA 2478 0.3584 MRNHWSLFHIVNTLWLCLCILLLSEVVLVLAGIQRIGKISPGFEGSQMNWIDKNGKFLVSNKQQYGFGFVTTSNDTTLFLLAIVHMDSTKVIWTANREFPVSNSDKFVFDEKGNAFLQKGKHLVWSTNTTGMKVSSMELQDNGNLVLLGNDSKVIWQSFDRPTDTLLPMQNFTKGMKLISEPDSNNFTYVLEIESHSGNVILSTGLQSPQTYWSMEKDIRKIVNENGVEVAFATLDANSWKFYDKKTSLLWQFIFSDASNATWIAVLGSDGFITFNNLQNKGSIGSSTTRIPQDSCSTPQPCDPYNICNGDKKCSCPSVLSSSHSCEPGFVSPCNSKSSIDLIKGDDGLNYFALEFLPPSSKTDLIGCKNSCSENCSCLAMFFHSSSGNCYLLDRIGSFVKTNNDSGFVSYIKVSRDGSTDTDTNTGESGNRNMQTIVVVIIVIVTLFVISGMIYVGLKYSKKKENMPESLVENSDDDDDFLKSLTSMPIRFSYNDLETATNNFSVKLGQGGFGSVYKGILQDETQIAVKKLEGIGQGKKEFKVEVSTIGSIHHNHLVRLKGFCAQGSHKLLVYEYMENGSLDKWIFKKNKELSLDWNTRYKIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDNFEAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPNENSEKSHFPSFAYKMVEQGKVEDLIDSELKMCENDVRVEIALNVAFWCIQENMCLRPSMNKVVQMLEGLCDVPKVPNGSPLGSKFYLNLLRPTSESGTSSEPTEGNSDAYLSAVRLSGPR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5531 825 SMART blect_4 49 162 IPR001480 -
Mal1g5531 825 SMART serkin_6 502 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5531 825 SUPERFAMILY Protein kinase-like (PK-like) 483 772 IPR011009 -
Mal1g5531 825 CDD B_lectin 51 162 IPR001480 -
Mal1g5531 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 825 - -
Mal1g5531 825 CDD PAN_AP_plant 360 415 - -
Mal1g5531 825 Gene3D Hepatocyte Growth Factor 351 434 - -
Mal1g5531 825 ProSiteProfiles Bulb-type lectin domain profile. 43 160 IPR001480 -
Mal1g5531 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 180 IPR036426 -
Mal1g5531 825 PIRSF SRK 11 821 IPR024171 GO:0004674
Mal1g5531 825 CDD STKc_IRAK 508 774 - -
Mal1g5531 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 825 - -
Mal1g5531 825 Gene3D Phosphorylase Kinase; domain 1 468 576 - -
Mal1g5531 825 Pfam Protein kinase domain 506 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5531 825 MobiDBLite consensus disorder prediction 799 825 - -
Mal1g5531 825 Pfam D-mannose binding lectin 91 173 IPR001480 -
Mal1g5531 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Mal1g5531 825 ProSitePatterns Protein kinases ATP-binding region signature. 508 531 IPR017441 GO:0005524
Mal1g5531 825 Gene3D Transferase(Phosphotransferase) domain 1 577 780 - -
Mal1g5531 825 Gene3D - 49 161 IPR036426 -
Mal1g5531 825 ProSiteProfiles Protein kinase domain profile. 502 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5531 Mal-Chr1 130413360 130415837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5531 481 782 Receptor kinase-like Gene Family AT5G20050 45.912 7.37e-90 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal1g5531 Pkinase 5.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5531 - - gmx:100787500 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5531 1 130413360 130415837 Mal1g5531 1 130413360 130415837 ECH
Mal2g0884 2 10225645 10228092 Mal1g5531 1 130413360 130415837 ECH
Mal1g5531 1 130413360 130415837 Mal2g0884 2 10225645 10228092 PCT