Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5510 ATGGATTCTCCAGAACCTTCTCAAATTAAGAACACTTCTTCCGCCTCCACTCTCAATCCCGCCACCACCACCACCACTAACAATCATTCCGATGAATCCCCTCAAGTTCAAGAATCTCCCTTTTTGAGATTTGTCAACACTTTATCTCCAATAAAGCCTGTCAAGGCTTCTCATACAGCACATGGGTTTCTCGGACTCAATTCTCCACCTCTCGTATTCAAGTCACCACGTATTAGTGGTCCCCACCGTGAAACACAATACTCGGAGAGGCCTGAAGACACCCATTTATCCGGTGGAGAAATATCTCAAACTGACATCGGAGACAACAGTCTCGGTGAAGCTCGTGGTGATTTGAAGAAATTGAATTCTCAACAGCCACTGCCAGAGGTGTTTATAACAGTTGCTCAGAAGGATTTTGACGTCAAGGATGATGCAAATACCCAAAGCTGCAGTCCTCCAGCATCTGTTGATGAATATTTGGCCGATCCCGTGGATGATCAAATGTATCCAGTCAACCCAGAAATGGAACAATCTACCAATGCAGTTGGGTCATCACCAACCGAGTCGGAGAATGTTATATTAAAATTTGATAGGAGTGATGGTCCTAATGACAGAGCAGAAGAACTATTGCCTTTGTTAGAGGAATCTAATATGGTTCATCAAGAAAAGCCAGCATATGTTGAAAGTCCTGCAACAATTGAAGGGGAGAAAAATGGTGCTGAATTGGTTTCTCAAGAGCACATAAACTTAGGCTCGAGTTCAGGTCCAGATGTTTTTGATAAACAATATTGCCATGATTTACTTCCCCAGTGTGCAGGAAATGATCAACGACATCATAGTGACTGTGCACCTCAATTGATGCCTGAGCCTATCCAGGTTGTTAAAGAATTTGAAAATTACAGTGAGACGGTGTCAACCTCACAAGTAAATTCAGAGAATATCCCACAAGATGGCTCTGAGGCTAGTCTAAAGTATCATGGCATCCGTAGACGCTGCCTACAATTTGGGGAAGCTGCTTCCATTGTTCTTGGAAGTAATAAGTCTCATGTGAAATTGAATACAACTTCAAGCAATGCGAAAATGGTTTCTGTGACAGGTTCCAAGCCACCAGGCATTGGGTTGCACTTAAATAGCATTATAAATGCAATGCCACCTAGTTGTGCTGCAACTACAGGTGTGAGATTATCAGATGGTTTACAGGGGTCCAAATCTTCTATAAGTGTGCATATAGTGGAAAACGTGACAAGATCCTCAACTCCGTCCAATATGGATGGTCAATCGTTTATTGATACTAGGAATGAGAGCCATGAAACTGATAATTCAGTAGTTGCAGATTCTTTCATTTCTGAGTCTCCTATCTTGACAGAATCCATCGACCTATATCCAGCAAAAGCACCTGTTAAGAGGAGGGTAAGCCCTACAGATGCTGAAAATGCAGAGGAATTCAACAATCCTAGCACCTCCAAGAAAAAGAAGAAAACAGGTAATGATGATGCCAGTGGACCTAAGACGTGCAACTGTAAGAAGAGCAAATGTTTGAAACTTTATTGTGATTGTTTTGGTGCCGGAATCTTCTGTGGCGACGGTTGTGCTTGCGAAGGCTGTGGTAATAGAGTAGAATTTCAGGATACAGTTGTTGAGACAAAGCATCAAATTGAATCTCGTAATCCACAAGCATTTGCTCCCAAGATTGTACTGTGTGCGACTGATGTTCCACCAAATAATATGGAAGACGTGAATATGACAACACCGGCATCAGCTAGGCACAAAAGAGGTTGCAACTGCAAAAGATCAAAGTGTACTAAAAAATATTGTGAATGTTTTCAGTCTAACGTTGGATGCTCGAGTGGATGTCGATGTGATGGATGTCAGAATGTCTTTGGCAAGAGAGAAGATTTTGTGGCAATGGAACATGCTTCGAGCAATGAAAGGGAGAGCAGCATTGTCGAAGAAGGGTTGGATGACAAACTGCACAAAAGACAGAAAATTGTGATCAGGACAGGCTTGTTACGACCAGCAAATCACCTCTCACCTGTAACACCATTGTTGCAATGCTCTGACCAAGGCAAGCAGGGTGCAAAGTCCAGACATACTTCTGCAAATTTAACTAAATCTTCTAAAAAACCACGCAGCAGTCTTGCACATTCAGAGTCGAATGATTCTCAAAAGAATGCACCTACACGTCCTTCATCTACAGAAAATGAGTGGATAGATCTTCCACCATACCAACTCTCCAATAGATGCGGTATTCGCCAGTTATCTGGGGGCTCTCTTCGTTGGCGCGGTAGTTCACCGATTACCCCAAGCGCTAATTTAGATGATGAATCAGAGGGAAAGCTCTTTGACATTCTAGAAGATGAAACACCTGATGTATTGAAGGAAGCTTCAACTCCCACCAAGTCTGTGAAAGCAAATTCTCCAATCCAAAAGAGAGTTTCTCCTCCACAAAGTCATCTACTTCGGATTGGATCAAGCTCCTCAGGTGGCTTGAAAAGTGGCAGGAAATTTATATTGCAATCTGTTCCTTCTTTCCCGCCGTTGACCCCTTGCGCTGATTCCAAAGTCCTTTGCAATGGCAATGAGGATTCGGGTAACAGCGCAGATAAAGTCACATAA 2616 0.4281 MDSPEPSQIKNTSSASTLNPATTTTTNNHSDESPQVQESPFLRFVNTLSPIKPVKASHTAHGFLGLNSPPLVFKSPRISGPHRETQYSERPEDTHLSGGEISQTDIGDNSLGEARGDLKKLNSQQPLPEVFITVAQKDFDVKDDANTQSCSPPASVDEYLADPVDDQMYPVNPEMEQSTNAVGSSPTESENVILKFDRSDGPNDRAEELLPLLEESNMVHQEKPAYVESPATIEGEKNGAELVSQEHINLGSSSGPDVFDKQYCHDLLPQCAGNDQRHHSDCAPQLMPEPIQVVKEFENYSETVSTSQVNSENIPQDGSEASLKYHGIRRRCLQFGEAASIVLGSNKSHVKLNTTSSNAKMVSVTGSKPPGIGLHLNSIINAMPPSCAATTGVRLSDGLQGSKSSISVHIVENVTRSSTPSNMDGQSFIDTRNESHETDNSVVADSFISESPILTESIDLYPAKAPVKRRVSPTDAENAEEFNNPSTSKKKKKTGNDDASGPKTCNCKKSKCLKLYCDCFGAGIFCGDGCACEGCGNRVEFQDTVVETKHQIESRNPQAFAPKIVLCATDVPPNNMEDVNMTTPASARHKRGCNCKRSKCTKKYCECFQSNVGCSSGCRCDGCQNVFGKREDFVAMEHASSNERESSIVEEGLDDKLHKRQKIVIRTGLLRPANHLSPVTPLLQCSDQGKQGAKSRHTSANLTKSSKKPRSSLAHSESNDSQKNAPTRPSSTENEWIDLPPYQLSNRCGIRQLSGGSLRWRGSSPITPSANLDDESEGKLFDILEDETPDVLKEASTPTKSVKANSPIQKRVSPPQSHLLRIGSSSSGGLKSGRKFILQSVPSFPPLTPCADSKVLCNGNEDSGNSADKVT* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5510 871 SMART CXC_2 500 541 IPR033467 -
Mal1g5510 871 SMART CXC_2 588 629 IPR033467 -
Mal1g5510 871 MobiDBLite consensus disorder prediction 415 429 - -
Mal1g5510 871 MobiDBLite consensus disorder prediction 469 502 - -
Mal1g5510 871 MobiDBLite consensus disorder prediction 681 737 - -
Mal1g5510 871 MobiDBLite consensus disorder prediction 415 437 - -
Mal1g5510 871 MobiDBLite consensus disorder prediction 715 737 - -
Mal1g5510 871 MobiDBLite consensus disorder prediction 681 709 - -
Mal1g5510 871 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 1 856 - -
Mal1g5510 871 ProSiteProfiles CRC domain profile. 501 628 IPR005172 -
Mal1g5510 871 MobiDBLite consensus disorder prediction 795 831 - -
Mal1g5510 871 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 856 IPR044522 GO:0003700
Mal1g5510 871 MobiDBLite consensus disorder prediction 484 498 - -
Mal1g5510 871 MobiDBLite consensus disorder prediction 63 107 - -
Mal1g5510 871 MobiDBLite consensus disorder prediction 1 39 - -
Mal1g5510 871 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 591 625 IPR005172 -
Mal1g5510 871 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 503 538 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5510 Mal-Chr1 130126454 130132354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5510 314 849 CPP Transcription Factor Family AT3G22780 33.031 8.08e-60 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mal1g5510 TCR 6.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5510 K21776 - gmx:547664 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5510 1 130126454 130132354 Mal1g5510 1 130126454 130132354 ECH