Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5506 ATGAAGATGTTTGGAATAAAGTCTCTTGGTCGTAATAATGATAAACAAAATCAAATCAAAGATGATTCTAGCAGCCAATATAGTCTTACCGGAATCCTTCTTCCACCTCTCGGTGCCACCACCGCGTATGACGGCCAGAAACATGAGCTCCAGCGTTACATCCTCTCCCCAAACAACCGTCATTATCAACAATGGTGCAAGTTTCTGATGATTTGGGTTTTCTACACTGCATGGGTGTGTCCTTTTGAATTCGGGTTTCTTGAGAAATCAAGAGGTGCACTCGCTTATGCAGACAACATTGTGAATGGATTTTTTTTCATTGACATTGTTGTCACCTTCTTTATTGCCTACGTTGACAATACTACTTTTCTATTCGTTGACGATCCAAGGAAAATTGCTATTAGATATGTGAAATCTTGGTTCTTCCTTGACGTGATCTCTATCATTCCTTATGAATTGGCTCAGCTTGCGTTGCCAACTTCACTCGAGATATATGCTTACTTCAATATTCTTCGCCTTTGGCGCCTTCGTAGAGCTAGTGCTATGTTTTCAAGGTTAGAAAAGGATAGGAATTATAACTACTTTTGGGTGCGCTGTTTAAAACTGATATGTGTAACACTATTTTCGGTGCATTGTGCTGCATGTTTTTTCTATTTTCTGGCTACAGGACGTAACCATAAAAAAACTACATGGCTATCACTCGTCTCTGATGCAGACAACCTATCTATGTGGGGTGGATATGTAACATCAGTATATTGGGCCATTGTGACACTTTCGTCAGTTGGTTATGGAGATTTGCATCCTGTAAATACCGATGAAATGATTTTTGACATTTTTTATATGCTATTCAATTTTGGACTTACTGCATATATTATAGGAAACATGACCAATTTGGTTGTTCATTGGACAGATAGAACTAAGAGATATAGAGATACTGTCCAAGCTGCATCAAATTTTTCTCATAGGAATCAGTTACCTAAGCGTTTGCAAGAGCAGATATTTGCTCATTTTCATATGAAGTACAAAACAAATATAGAAGGATTGGAGCAACAAGAGATAATTGATTCCCTTCCGAAAGCCATTCAGTCGAGCATCGCACACTACCGATTCTTAGAAATTATCGAAAATGTATACTTGTTTCGTGGAGTGTCAAGTGACCTAAAATTTCAACTGGTCACCGAGTTGAAGTGCGAGTTTTTTCCTCCAAAAGAAGATGTAATCTTGCATAATGAAACACCAACAGACTTTTATATAATGACTTCTGGAGCTGCTGCTTTTGATGAGGCAAAGCGAGAAAGTGTTTTTGGAGAAATAGGAGTACTATGTTATAGGCCACAACTTTTTACAGTTCGGACCAAACGATTAAGCCGGATCTTGCGTTTGAGTCGAACAGCATTTCTAACCCTTGTTCATAACAATGTTGAAGACGGAACAATAATCATGAACAATTTTCTTCAGCATGTGCAAAAATTAAAGTATCCAATGATGGAAAGTGTTATGACTGAAATAGAGACAATGTTGTCAAGAGGCAAAATGGATTTGCCTATAAGTTTAATATTTGCTGCTAACAAAGGTGATGATTCATTGTTGCATCAATTGCTGAAGAAGGGTTCTTCAGATCCAAATGAAATAGATAATAAAACTGGAAAGACAGCGCTGCATATTGCAGCTTCTAAAGGTAGTGACCATTGTGTGGCATTGCTTCTTGAATTTGGGGCAGATCCCAATATACAAGATTTTGATGGAATTATACCACTATGGGAATCAATTAAGGGAGGGCATGAAATAGTGACAAAACTACTTATAGACAATGGTGCAGATATATCTTCCGCTGATGTAGCTCGTTTCGCATGCTATGCTGTGGAGAAAAATGATATTCAATTACTAAAAGATATTGTACAATATGGTGGTGATATTGTGAAAAAGACCACAAATAATGGAACCACTGCACTTCATGCTGCTGTATGTGATGGAAATATTGAAATAGTTAAGTTTCTTGTCGAACAAGGCGCAGATGTTGATAAGCCAGATAATTTTGGTTGGACTCCAAGAGCTTATGCAGATCATCAATGCCATGAAGAAATACAAAATATGTTTAAAGAAATTGAACAAGATAACAAAATTCCTTATGTTATTCCACCAATGCCAAATAATAATCATGGAGGGCCATTTATTGGAAAGTGTCAAAGTGAACCTTCTATACTAGCTCTTCCTCAAAGTGGTATCTTTCCTCCTAATCAAGAATTGACATGGTTGGATACTCATCAGAAAAGAAGGGTTAGCCCTTTTAGAAATTCCTTTTTCAGAATGATCGCCGCTGCTAATCGAGATAAAATGGGTTCCCCTTCATCTCAAAGTAGTCGCACTACAACTACTACAACAAGTGTGATTGAATTACCAATTAGAGTAACACTTAGTTGTCAAGAAAAAAGTGAATATTCTAAAAGGCTTGTTTTTCTACCAAAGTCTCTTCAAGAGTTGCTAGATGTTGGTGCTAAAAAGTTTGATTTCTCTCCCACTAAAATTTTGACTAAAGATGGAGCTGAAGTTGAAGACTTAAACTTGGTAAGAGAGGGTGATCATCTTATTCTTGTATGA 2598 0.3718 MKMFGIKSLGRNNDKQNQIKDDSSSQYSLTGILLPPLGATTAYDGQKHELQRYILSPNNRHYQQWCKFLMIWVFYTAWVCPFEFGFLEKSRGALAYADNIVNGFFFIDIVVTFFIAYVDNTTFLFVDDPRKIAIRYVKSWFFLDVISIIPYELAQLALPTSLEIYAYFNILRLWRLRRASAMFSRLEKDRNYNYFWVRCLKLICVTLFSVHCAACFFYFLATGRNHKKTTWLSLVSDADNLSMWGGYVTSVYWAIVTLSSVGYGDLHPVNTDEMIFDIFYMLFNFGLTAYIIGNMTNLVVHWTDRTKRYRDTVQAASNFSHRNQLPKRLQEQIFAHFHMKYKTNIEGLEQQEIIDSLPKAIQSSIAHYRFLEIIENVYLFRGVSSDLKFQLVTELKCEFFPPKEDVILHNETPTDFYIMTSGAAAFDEAKRESVFGEIGVLCYRPQLFTVRTKRLSRILRLSRTAFLTLVHNNVEDGTIIMNNFLQHVQKLKYPMMESVMTEIETMLSRGKMDLPISLIFAANKGDDSLLHQLLKKGSSDPNEIDNKTGKTALHIAASKGSDHCVALLLEFGADPNIQDFDGIIPLWESIKGGHEIVTKLLIDNGADISSADVARFACYAVEKNDIQLLKDIVQYGGDIVKKTTNNGTTALHAAVCDGNIEIVKFLVEQGADVDKPDNFGWTPRAYADHQCHEEIQNMFKEIEQDNKIPYVIPPMPNNNHGGPFIGKCQSEPSILALPQSGIFPPNQELTWLDTHQKRRVSPFRNSFFRMIAAANRDKMGSPSSQSSRTTTTTTSVIELPIRVTLSCQEKSEYSKRLVFLPKSLQELLDVGAKKFDFSPTKILTKDGAEVEDLNLVREGDHLILV* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5506 865 PRINTS Ankyrin repeat signature 597 611 IPR002110 GO:0005515
Mal1g5506 865 PRINTS Ankyrin repeat signature 549 564 IPR002110 GO:0005515
Mal1g5506 865 Pfam Ankyrin repeats (3 copies) 619 687 IPR002110 GO:0005515
Mal1g5506 865 Pfam Ankyrin repeats (3 copies) 518 611 IPR002110 GO:0005515
Mal1g5506 865 Pfam KHA, dimerisation domain of potassium ion channel 802 864 IPR021789 -
Mal1g5506 865 PANTHER POTASSIUM CHANNEL AKT1 12 864 IPR045319 GO:0005249|GO:0006813
Mal1g5506 865 SMART cnmp_10 379 485 IPR000595 -
Mal1g5506 865 ProSiteProfiles cAMP/cGMP binding motif profile. 379 487 IPR000595 -
Mal1g5506 865 Pfam Ion transport protein 64 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal1g5506 865 SUPERFAMILY Voltage-gated potassium channels 59 300 - -
Mal1g5506 865 ProSiteProfiles Ankyrin repeat region circular profile. 548 579 - -
Mal1g5506 865 Gene3D Helix hairpin bin 305 367 - -
Mal1g5506 865 PRINTS EAG/ELK/ERG potassium channel family signature 75 82 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal1g5506 865 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal1g5506 865 PRINTS EAG/ELK/ERG potassium channel family signature 109 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal1g5506 865 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal1g5506 865 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal1g5506 865 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mal1g5506 865 CDD CAP_ED 379 481 IPR000595 -
Mal1g5506 865 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Mal1g5506 865 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g5506 865 Gene3D - 514 701 IPR036770 -
Mal1g5506 865 SUPERFAMILY cAMP-binding domain-like 304 487 IPR018490 -
Mal1g5506 865 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Mal1g5506 865 ProSiteProfiles Ankyrin repeat region circular profile. 581 612 - -
Mal1g5506 865 ProSiteProfiles Ankyrin repeat profile. 646 678 IPR002110 GO:0005515
Mal1g5506 865 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 12 864 - -
Mal1g5506 865 Gene3D - 63 300 - -
Mal1g5506 865 SUPERFAMILY Ankyrin repeat 516 702 IPR036770 -
Mal1g5506 865 ProSiteProfiles Ankyrin repeat region circular profile. 646 678 - -
Mal1g5506 865 SMART ANK_2a 513 543 IPR002110 GO:0005515
Mal1g5506 865 SMART ANK_2a 612 641 IPR002110 GO:0005515
Mal1g5506 865 SMART ANK_2a 548 577 IPR002110 GO:0005515
Mal1g5506 865 SMART ANK_2a 581 610 IPR002110 GO:0005515
Mal1g5506 865 SMART ANK_2a 646 675 IPR002110 GO:0005515
Mal1g5506 865 Gene3D Jelly Rolls 368 494 IPR014710 -
Mal1g5506 865 ProSiteProfiles KHA domain profile. 802 865 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5506 Mal-Chr1 130058677 130063975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5506 20 864 Ion Channels AT2G25600 53.551 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5506 K21867 - gmx:100809960 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5506 1 130058677 130063975 Mal1g5506 1 130058677 130063975 ECH
Mal1g5506 1 130058677 130063975 Mal2g0852 2 9901892 9907626 PCT