Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5505 ATGCATGCATGCTGTGGAAGCTTGAGCACAGTTGAAACATTGGCATCTGCAGCTATATGTGGAATTATCCACTCAATATTTGGTGGTCAACCTTTGATGATTGTAGGAGTTGCTGAACCAACTGTTATCATGTACAACATTATATACCATTTTTGCTTAAAAAGACCAGAATTAGGTTCCAAGCTTTTTTTGGCTTGGGCTGGTTGGGTTTGTGTTTGGACATCATTGTTGTTGATGCTGCTTGCGATTTTCAATGCATGTTCGATTATCACTAGGTTTACTAGGATTGCAGAGGAATTATTTGGCATGCTGATTACTGTGCTTTTCATCCAACAGGCTATAAAGGGAGTCATAAGTGAGTTCAAGATACCACATGAAGAAAAAAATCCCTTGCTAGAGGAATATCAATTCCATTGGCGGTATATAAATGGATTACTTGCAATCATTTTCTTTTTTGGGTTGCTTTTCACTGCCATGGCAAGTAGAAGAGCAAGAAAATGGCGATATGGAACAGGGTGTATACGAGGTTTCATTGCAGATTATGGAGTTCCTGTAATGGTAGTGTTTTGGACTGCACTATCTTATACCGTACCGAACAAAGTTCCATCTGCTGTTCCTAGAAGGTTGTTGTGTCCACTTCCTTGGGAATCTAAATCTCTCTACCACTGGACAGTAGTGAAGGATATGGGAAAGGTACCCTTGCCATATATCTTTGGAGCATTTATTCCAGCTATAATGGTAGCAGGTTTATACTTTTTCGATCATAGTGTTGCTTCCAAGATGACTCAACAGAAGGAATTCAACCTTCAAAAACCATCTGCTTACCACTATGATATTTTTCTTCTTGGAATAATGACTCTTGTTTGCGGTATTCTCGGTCTCCCTCCAGCAAATGGAGTCCTTCCTCAGTCCCCTATGCATACTAAGAGTTTAGCGATTCTTAGAAGGCAGTTGATCCGAAAGAAGGTAGTGAAGAGTGCCAAGGAATGCATTAGGCAACAAGGAAGCACTTCTGAATTATACGGAAAGATGCGAGCCGTGTTTATAGAAATGGATGCCGCGCCTACCGTAAGTATTGTTAAAGAGTTGGAGACTTTGAAGGAGGTTGTAATGAAAACTAACGAAAAAAACGGTGCAAAGGAAAAATTTGATCCTATTAAACATATAGATGCCTATTTGCCTGTTAGAGTTAATGAGCAAAGAATGAGCAACTTGTTGCAGTCTATCCTTCTTGCCCTATCACTTTTAGCTGTTTCTCTCATCAACAGGATACCTACCTCAGTTCTTTGGGGATATTTTGCTTATATGGCAATTGATAGTCTCTCAGGGAATCAATTTTGGGAAAGATTATTGCTTCTCTTTATCACCCCAAGAAGGCACTACAAAATTTTGGAAGGCTCTCATGCCTCATTTGTAGAGTCAGTACCATACAAGACAATAGCTGCATTTACAGTTTTACAGTTTCTATATTTTGCACTCTGCTATGGACTGACATGGATACCTATTGGTGGAATATTGTTTCCATTACCGTTCTTTCTTCTCATTACTATTAGAGAGAAATTGCTTCCAAGGTTATTCAAGGCAAGCCATCTTCAGGAATTAGATGCTTCTGAGTATGAGGAAATTATTGGTGCTTCACATAATGTACCACTAATGGACAAAGAAGTACGTACTAGTACTGCTGAGAGTGATAGCTCGGAAGAATATTATTACGATGCAGAGATTTTGGATGAGATGACAACTCATAGGGGAGAATTGAAATTACGAACTGTTAACCAAAATGATAGTAGAAGCTTCAATGGTAGCTTCACTTATGGCTTCAGCGAAGACAGACACTTTCAGGTAAAACACATTGAAGAACGCCAACTCAAATTTGTTAATTCTAATTTTAGTTCCAAAAATTATCTTGGAGGTATTAATATGATCAAGTTTTCAATTTTATGGCTTGGTCTTGTACAGGTTTATCCTGATCCGGATTCGATGAATTAG 1989 0.3866 MHACCGSLSTVETLASAAICGIIHSIFGGQPLMIVGVAEPTVIMYNIIYHFCLKRPELGSKLFLAWAGWVCVWTSLLLMLLAIFNACSIITRFTRIAEELFGMLITVLFIQQAIKGVISEFKIPHEEKNPLLEEYQFHWRYINGLLAIIFFFGLLFTAMASRRARKWRYGTGCIRGFIADYGVPVMVVFWTALSYTVPNKVPSAVPRRLLCPLPWESKSLYHWTVVKDMGKVPLPYIFGAFIPAIMVAGLYFFDHSVASKMTQQKEFNLQKPSAYHYDIFLLGIMTLVCGILGLPPANGVLPQSPMHTKSLAILRRQLIRKKVVKSAKECIRQQGSTSELYGKMRAVFIEMDAAPTVSIVKELETLKEVVMKTNEKNGAKEKFDPIKHIDAYLPVRVNEQRMSNLLQSILLALSLLAVSLINRIPTSVLWGYFAYMAIDSLSGNQFWERLLLLFITPRRHYKILEGSHASFVESVPYKTIAAFTVLQFLYFALCYGLTWIPIGGILFPLPFFLLITIREKLLPRLFKASHLQELDASEYEEIIGASHNVPLMDKEVRTSTAESDSSEEYYYDAEILDEMTTHRGELKLRTVNQNDSRSFNGSFTYGFSEDRHFQVKHIEERQLKFVNSNFSSKNYLGGINMIKFSILWLGLVQVYPDPDSMN* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5505 662 PANTHER ANION EXCHANGE PROTEIN 5 599 IPR003020 GO:0005452|GO:0006820|GO:0016020
Mal1g5505 662 Pfam HCO3- transporter family 6 122 IPR011531 GO:0006820|GO:0016021
Mal1g5505 662 Pfam HCO3- transporter family 143 316 IPR011531 GO:0006820|GO:0016021
Mal1g5505 662 Pfam HCO3- transporter family 395 486 IPR011531 GO:0006820|GO:0016021
Mal1g5505 662 PANTHER BORON TRANSPORTER 6-RELATED 5 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5505 Mal-Chr1 130048863 130054959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5505 6 592 Antiporters AT5G25430 66.553 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5505 K24194 - gmx:100808880 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5505 1 130048863 130054959 Mal1g5505 1 130048863 130054959 ECH
Mal2g0851 2 9897062 9900347 Mal1g5505 1 130048863 130054959 ECH
Mal1g5505 1 130048863 130054959 Mal2g0851 2 9897062 9900347 PCT