Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5489 ATGGAGAGCAATGAAGTATCAAGAGTTGATAGTGTAAGAAGAGCAAGTAGTTCTAACATATGGAGGAACAATAGCATGGATATTTTCTCAACATCTGAACGTGAAAATGATGAAGAAGCACTTAAATGGGCTGCTATTGAGAGACTTCCTACTTATTTAAGGATTAGAAGAAGTATACTCAATAATGAAGAAGGAGAAGGGAGAGAGATTGATATTAAAAAGCTTGGTTTAACTGAGAGAAAGGTTTTACTAGAGAGACTTGTGAAAATTGCTGAAGAAGATAATGAAAAGTTCTTGTTGAAACTTAAGGAAAGAATGGAAAGAGTTGGACTTGATATTCCAACAGTTGAAGTGAGATTTGAGCATATAAATGTGGAAGCACAAGTTTATGTTGGAGGCAGAGCTTTGCCTTCATTGCTCAACTTCTTTGTTAATGTGTTAGAGGGATTCTTAAATTATCTTCATATCATTCCAAGTCCAAAGAAACCATTACATATTCTTCAGAATGTTAGTGGAATCATAAAGCCTCAAAGAATGACATTACTTTTGGGGCCCCCAGGCTCTGGAAAGACCACTTTGCTTTTGGCCTTGGCTGGAAAACTTGCTAAAGATTTAAAACAATCTGGGAGAGTAACATACAATGGAAAAGGACTAAAAGAGTTTGTTCCGCAAAGAACATCAGCTTATATAAGTCAATATGATAATCACATTGGAGAAATGACTGTGAGAGAAACACTAGCTTTCTCAGCAAGATGTCAAGGTGTTGGACACAATTATGATATGTTGACTGAACTACTAAGAAGAGAGAAAGAAGCAAAAATTAAACCAGATCCTGATATTGATGCCTATATGAAGGCAGCAGCACTAGAAGGACAGCAGGCAAGTGTGGTAACTGACTATATTCTCAAGATTTTAGGACTTGAAATCTGTGCTGATATAATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGACAAAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCTATAAGGGTATTGTTCATGGATGAGATATCAACTGGTTTGGACAGTTCAACAACTTTTCAAATAATCAGCTCAATCAGACAATCAATCCATATTCTGAATGGAACTGCACTTGTGTCTTTGCTACAACCAGCACCAGAAACTTATGAATTATTCGATGATATAATACTTCTCACAGATGGACAAATTGTGTATCAAGGACCAAGAGAAAATGTACTTGAGTTTTTCGAATCAATGGGATTCAAGTGTCCCGAGAGAAAAGGCGTTGCTGATTTCTTACAAGAAGTGACATCAAGGAAAGATCAATGGCAATATTGGGCAAATAAAGATGAGCCTTATAGTTTTGTTACTGTCAACGATTTCGCTGAAGCCTTTCAGATATTTCACATAGGGCAAAAACTTGGAGATGAACTAGCCAAACCTTTTGACAAATCTAAATGCCATGCAAATGTCTTGACCACAAAGAAATATGGTGTTAACAAGAAGGAGCTGTTGAAGGCTTGTGCTAGCAGAGAATTTTTGCTTATGAAGCGAAATTCTTTTGTTCACATTTTCAAAGTCACTCAACTTATTTATTTAGCTATCATGACAACAACATTGTTTCTAAGAACAAAGATGCATAAAGATACTGTGGAGGATGGAGGAACATACATGGGAGCACTATTTTTCACAGTAACAGTAGCAATGTTCAATGGAATATCAGAACTAAATATGACAATCATGAAACTTCCTGTCTTTTACAAACAAAGAGATCTTCTTTTCTATCCGGCATGGGCTTATTCTATTCCACCATGGATCCTCAAAATACCAATAACACTCATAGAAGTTGCTATTTGGGAAGCCATCACTTACTATGCTATTGGCTATGATCCAAGTTTTGTAAGGCTTTTAAAACAGTACTTGATAATCCTGTGCATTAACCAGATGGCTTCTTCACTATTTCGGATGATGGCAGCATTAGGAAGGGATGTTATAGTTGCAAACACTGTTGGGGCATTTGCGTTACTAGTAGTTCTAGTTTTGGGAGGATTTGTGATTTCAAGAGAGGATGTGCACAAATGGTTTCTGTGGGGTTATTGGTCGTCGCCATTGATGTATGGACAGAATGCTATTGCTGTGAATGAATTTCTTGGACATAGTTGGAGAAAGGTTCCTCATAATTCCAACGAAACATTGGGAGTTTTGACAATGAAAACTCGCGGTTTTTTCCCACAAGCTTATTGGTATTGGATTGGTGTAGGAGCATTGATTGGTTATGTTTTTCTATTTAACTTTCTGTACACATTGGCCTTACAATATCTCAGCCCATTCCGAAAGGATCAATCAGGTCTATCAGAGGAGGAATTGCTTGAAAGAGATGCTTCAACAGCTGAAGAATTTACTCATTTACCGACTCAAAAGAGAATAACAAAAATGGTAGATGAAGAACTTATACCTTCGAGATCGTTTTCTTCTGGAAGAATTGGTAATGATAAAGCTAGTAGAAGTGTAGGGAGGGGAATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGACGAAATCAGATATGCTGTGGATATGCCTCTGGAAATGAAAAGTCAAGGAGTGTTCGAGGATCGCCTCGAGCTTTTGAAGGGTATTAGTGGTGCCTTTCGGCCTGGAGTACTAACAGCTTTGATGGGTGTAAGTGGTGCTGGAAAAACTACTCTAATGGATGTTTTAGCCGGAAGGAAAACTGGTGGATATATTGATGGAAACATCACAGTATCTGGCTATCCGAAGAATCAAAAAACATTTGCTCGCATATCAGGATATTGCGAACAATTTGATATTCACTCACCTAATGTTACAGTCTATGAGTCTTTGCTGTATTCGGCATGGCTCCGATTACCACCTGAAGTTGATCAAGCAACTAGAAAGATGTTTATTGAGGAAGTTATCGAGCTTGTAGAGCTTAACTCATTAAGAGAAGCACTTGTTGGATTGCCAGGCGAGAATGGACTTTCAACCGAACAGCGCAAGAGACTTACGATTGCAGTTGAACTTGTAGCTAATCCATCGATAATATTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACTGTGAGGAACACCGTTGACACAGGGCGTACTGTCGTTTGCACGATCCATCAGCCAAGTATTGACATATTTGACGCCTTTGATGAGCTTCTACTTATGAAACTAGGAGGTGAACAAATATATGCCGGTCCATTAGGCCGCCACTGTTCTCATTTGATTCATTACTTTGAGGCTATTGAAGGAGTTCCTAAGATCAAAGATGGTTATAATCCAGCAACATGGATGTTGGAAGTTACATCAGCAGGATCAGAAGCAAATCTTAAGGTCAACTTCACTAATGTTTACAGAAACTCAGAACTATACCGGAGAAACAAACAATTGATCCAGGAACTAAGTATACCTCCTCAAGATTCAAAGGATTTATACTTTGATACTCAATATACACAAACTATGCTGTCACAGTGTAAAGCTTGCTTATGGAAACAACATTTATCGTATTGGCGAAACACGTCGTATACAGCAGTTAGACTGTTATTTACAACACTAATAGCCATCTTGTTTGGGGTCATATTTTGGGACATTGGCTTGAAAAGGAGAAAGGAACAAGATCTTTTCAATGCAATGGGATCAATGTATGCTTCTGTTATATTTATTGGAGTACAAAATGGTGCATCAGTGCAGCCTGTAATAGCAGTTGAGAGAACAGTCTTTTATAGAGAAAGAGCTGCTGGAATGTATTCTGCTTTGCCTTATGCAATAGCACAGGTTATTATAGAGCTTCCCCACATCTTGGTTCAGACCCTGGTATATGGAATCATTGTGTATGCCATGATGGGATTTGAGTGGACAGCATCAAAATTCTTGTGGTATATTTTCTTCAATTACTTCACCTTCTTGTACTACACATTCTATGGTATGATGACCATGGCCATCAGTCCCAACCCACATGTTGCTGCCATATTGTCCTCCTCATTCTATGCAATATGGAACCTTTTCTCAGGCTTTATCATTCCCTTATCTAAAATACCAATATGGTGGAAGTGGTACTATTGGGTTTGTCCTGTTGCATGGACATTGTATGGATTGGTGACTTCTCAATATGGAGACAACATGCACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAGGAATTACTTTGGTTTTGAACATGACTTCCTAGGAGTGGTTGCAATTGTTGTGGCTAGTTTCTCAGTGTTGTTTGCATTCATCTTCACCTTTGGTATCAAAGCATTCAACTTCCAAAAAAGATGA 4341 0.3847 MESNEVSRVDSVRRASSSNIWRNNSMDIFSTSERENDEEALKWAAIERLPTYLRIRRSILNNEEGEGREIDIKKLGLTERKVLLERLVKIAEEDNEKFLLKLKERMERVGLDIPTVEVRFEHINVEAQVYVGGRALPSLLNFFVNVLEGFLNYLHIIPSPKKPLHILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLAKDLKQSGRVTYNGKGLKEFVPQRTSAYISQYDNHIGEMTVRETLAFSARCQGVGHNYDMLTELLRREKEAKIKPDPDIDAYMKAAALEGQQASVVTDYILKILGLEICADIMVGDGMIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTFQIISSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWANKDEPYSFVTVNDFAEAFQIFHIGQKLGDELAKPFDKSKCHANVLTTKKYGVNKKELLKACASREFLLMKRNSFVHIFKVTQLIYLAIMTTTLFLRTKMHKDTVEDGGTYMGALFFTVTVAMFNGISELNMTIMKLPVFYKQRDLLFYPAWAYSIPPWILKIPITLIEVAIWEAITYYAIGYDPSFVRLLKQYLIILCINQMASSLFRMMAALGRDVIVANTVGAFALLVVLVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVPHNSNETLGVLTMKTRGFFPQAYWYWIGVGALIGYVFLFNFLYTLALQYLSPFRKDQSGLSEEELLERDASTAEEFTHLPTQKRITKMVDEELIPSRSFSSGRIGNDKASRSVGRGMVLPFQPLSLTFDEIRYAVDMPLEMKSQGVFEDRLELLKGISGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITVSGYPKNQKTFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPPEVDQATRKMFIEEVIELVELNSLREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKLGGEQIYAGPLGRHCSHLIHYFEAIEGVPKIKDGYNPATWMLEVTSAGSEANLKVNFTNVYRNSELYRRNKQLIQELSIPPQDSKDLYFDTQYTQTMLSQCKACLWKQHLSYWRNTSYTAVRLLFTTLIAILFGVIFWDIGLKRRKEQDLFNAMGSMYASVIFIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYAIAQVIIELPHILVQTLVYGIIVYAMMGFEWTASKFLWYIFFNYFTFLYYTFYGMMTMAISPNPHVAAILSSSFYAIWNLFSGFIIPLSKIPIWWKWYYWVCPVAWTLYGLVTSQYGDNMHKLENGQRVEEFVRNYFGFEHDFLGVVAIVVASFSVLFAFIFTFGIKAFNFQKR* 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5489 1446 Pfam ABC transporter 877 1029 IPR003439 GO:0005524
Mal1g5489 1446 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1446 - -
Mal1g5489 1446 Pfam ABC-2 type transporter 382 434 IPR043926 GO:0140359
Mal1g5489 1446 Pfam ABC-2 type transporter 1175 1387 IPR013525 GO:0016020|GO:0140359
Mal1g5489 1446 Pfam ABC-2 type transporter 503 715 IPR013525 GO:0016020|GO:0140359
Mal1g5489 1446 Pfam ABC-transporter N-terminal 67 142 IPR029481 -
Mal1g5489 1446 Pfam ABC transporter 167 349 IPR003439 GO:0005524
Mal1g5489 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 862 1087 IPR027417 -
Mal1g5489 1446 SMART AAA_5 176 401 IPR003593 -
Mal1g5489 1446 SMART AAA_5 886 1078 IPR003593 -
Mal1g5489 1446 Pfam Plant PDR ABC transporter associated 720 781 IPR013581 -
Mal1g5489 1446 Gene3D - 154 456 IPR027417 -
Mal1g5489 1446 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 10 1446 - -
Mal1g5489 1446 CDD ABCG_PDR_domain2 846 1084 IPR034003 -
Mal1g5489 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 424 IPR027417 -
Mal1g5489 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1101 IPR003439 GO:0005524
Mal1g5489 1446 Gene3D - 862 1096 IPR027417 -
Mal1g5489 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 424 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5489 Mal-Chr1 129918111 129927784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5489 874 1061 Calmodulin-binding Proteins AT2G36910 26.020 2.04e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5489 K08711 - gmx:100810505 2543.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5489 1 129918111 129927784 Mal1g5489 1 129918111 129927784 ECH
Mal1g5489 1 129918111 129927784 Mal2g0842 2 9730921 9738402 PCT