Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5488 ATGAGAAAAATGGAGAGCAATGACACTAAAACATGGAAGAACCATTGCATGGAAGTTTTTTCAAAAGCTAAACGTGAAGATGATGAGGAAGCTCTAAAGTGTGTTGCAATGAAGAGAATTCTTACAAGTGCATGCTTTAGGAAAAATGTAGAGACCAAAGAAGAAGGTAAAGGAAAAGAAGTTGACAATTTCATGCAACTTGAGTTGACTGAAAAAAAGGCCTTGTTAGAGAGACTTGTGAAAATTGCTGAAGAAGATAATGAAAAGTTCTTGTTGAAACTCAAGGAAAGAATGGACAGAGTTGGACTTGAACTTCCAACAATTGAAGTTAGATTTGAGGATATAAATGTGGAAGCACAAGTTTATGTTGGTAGCAGAGCATTGCCTACATTACTTAACTTCTTTGTGAATGTGATTGAGGGGTGTTTAAATAATCTTCAAATAATTCCAAGTCCAAAGAAACAGTTACATATCCTTCAGAATGTTAGTGGAATCATAAAGCCTAGAAGGATGACATTGCTTTTAGGGCCACCTGGTTCTGGAAAGACCACTTTGTTGTTGGCATTGGCTGGGAGACTTGGCAAAGATTTGAAGCAATCTGGAAGAGTAACATACAATGGGAAAGGACTAGAAGAGTTTGTTCCACAAAGAACATCAGCTTATATAAGTCAATATGATAATCACATTGGAGAAATGACTGTGAGAGAAACACTAGCTTTCTCAGCAAGATGTCAAGGGGTTGGACAAAATTACGAAATGTTGACTGAACTACTGAGAAAAGAGAAGGAATCGAAGATTGAACCAGATCCTGATATTAATGCCTTTATGAAGGAAGCAGCAATAGAAGGCCACCAGAACAGTGTGGTCATTGACTACATTCTAAAGATTTTAGGACTTGATGTTTGTGCTGACACAATGGTAGGGGACCAAATGATACGAGGTATCTCAGGAGGCGAGAGAAAGCGACTTACTACAGGTGAGATGCTGGTTGGACCTATAAAGGTGTTGTTCATGGATGAGATATCAAATGGTTTGGACAGTTCAACAACTTTTCAGATAATCAACTCAATCAAGCAATCTATTCATATTCTAAATGGAACTGCACTTGTTTCTCTTCTACAACCAGCACCAGAAACTTATGAACTATTTGATGATATAATACTTCTCACCGATGGACAAATTGTGTATCAAGGACCAAGAGAAAATGTACTTGAGTATTTTGAATCAATCGGTTTCAAGTGTCCTGAAAGAAAAGGCGTTGCTGATTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATATTGGGCGCGTAAAGATGAACCTTATAACTTTGTCACTGTCAAGGATTTTGCTCGGGCCTTCGAATTATTTCACGTAGGTCAACAACTTGGAGAAGAGATGGCCGATTCGTTTGACAAGTCTAAATTTCATTCAAATGTCTTGATCACAAAGAAATATGGTATTAACAAGAAGGAGCTGCTAAGGGCTTGTACTAGCAGAGAATTATTGCTTATGAGGCGAAATTCGTTTGTCTACATGTTCAAAGCCACCCAACTTACTTATTTAGCTACCTTGACAACGACGTTATTTCTACGAACCAAGATGTATCACTCTACCATTGAGGATGCACAAACATACATGGGAGCACTATTCTTCACGGTGACTGTGGCGATGTTCAATGGAATATCAGAGCTAAATATGACTATCATGAAACTTCCTATCTTTTACAAGCAAAGAGACCTTCTTTTCTATCCATCATGGGCTTATTCTCTTCCACCATGGATCCTCAAAATACCAATAACTCTCATAGAAGTTGCCATTTGGGAATGCATCTCTTACTATGCCATTGGCTATGATCCAAATATTGGAAGGTTTTTTAAACAGTCCTTGGTAGTCCTATGCATTAATCAGATGGCGTCTGCGCTATTTCGGTTTATGGCAGCATTAGGAAGGGATATTGTAGTTGCAAACACATTTGGAACATTTTCACTACTTGCAGTTACTGTTTTAGGAGGATTTGTTATTTCAAGAGAGGATGTGCACAAATGGTTTCTGTGGGGTTATTGGTCGTCGCCCTTGATGTATGGACAAAATGCTATAGCTGTGAATGAATTTCTTGGACATGGTTGGAGAAAGGTACTTCCTAATTCAAATGAAACATTGGGAGTATCAATACTAAAATCTCGCGGATTTTTTCCACAAGCTTATTGGTATTGGATTGGAATTGGAGCTTTGATTGGTTATGTTTTTCTATTTAATTTTCTCTTCGCGTTGGCTTTGCACTATCTCAGTCCATTCAGAAAGGATCAAGCAGGCTTATCCCAAGAGAAATTACAAGAGAGAAATGCTTCAACAGCTGAAGAGTTCATTCAATCACAAACACAAAAGAGCTCTTCTGATACGAAGATGGACGAAGCAGTTGGTGAAAACAAAGCTAGCAGTAGTGGAAGAAAAGGCATGGTTCTTCCTTTTGAACCTCTATCCCTCACTTTTGATGATATCAGATATTCTGTTGACATGCCACAGGGAATGAAAAGTCAAGGAGTTTGCGAGGATCGTCTCGAACTTTTGAAAGGTATTAGTGGTGCTTTTAGACCAGGAGTACTAACAGCCCTTATGGGTGTAAGTGGTGCTGGAAAGACTACTCTAATGGATGTTTTAGCTGGAAGAAAAACTAGTGGATATATTGAAGGAAGCATCACAGTATCCGGCTATCCGAAGAATCAAAAAGCATTTGCTCGCATATCGGGATATTGTGAACAATTCGATATTCACTCACCCAATGTTACGGTCTATGAATCTTTGCTGTACTCTGCATGGCTTCGTTTATCGCCTGAAGTTGATCATGCAACTAGAAAGATGTTTATTGAGGAAGTTATGGAGCTTGTAGAGCTTAACTCATTAAGAGAAGCACTTGTTGGAATGCCAGGCGAAAATGGACTTTCAACCGAACAGCGCAAGAGACTTACAATTGCAGTTGAACTTGTAGCAAATCCATCGATAATATTCATGGATGAACCAACCTCTGGACTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACAGTAAGGAACACCGTGGACACAGGACGTACTGTGGTGTGCACGATCCATCAGCCGAGTATTGACATATTTGATTCCTTTGATGAGCTTCTACTTCTGAAATTGGGAGGGGAGCAGATATATGCTGGTCCAATAGGCAACCAATGTTCCGATCTGATCCAGTACTTCGAGGCTACTCAAGGAGTTCCGAAGATCAAAGATGGTTATAATCCTGCAACATGGATGTTGGAAATTACATCAGCAAGAAAAGAGGCAAATCTTAAGGTCAATTTCACTGATGTGTACAAAAACTCAGAACTACACCGGAGAAATAAACAATTGATCCAGGAGCTTAGTGTTCCTTCTCAAAGTTCAAAAGATTTATACTTTGATGCTCAATATTCAAAGACATTTGTAGCACAATGTTTAGCTTGTTTATGGAAACAACATTTATCATATTGGAGGAATACATCATATACAGCAGTTAGACTCCTATTTACTATAATGACAGGTTTATTATTTGGCCTAATATTTTGGGGCGTTGGCTCGAAAAGTAAAAAGGAGCAAGATCTGTTCAATGCAATGGGATCAATGTATGCTGCTGTTACCTTCATAGGGGTTGTAAATGGTGCCTCAGTACAACCAATAGTAGCTATTGAGAGAACAGTTTTCTACAGAGAAAGATCTGCAGGAATGTATTCAGCTTTGCCTTATGCTCTTGCACAGGTTATTATAGAGCTTCCCCACATCTTGGTTCAGGCTCTTGTATATGGTATCATAGTATATGCCATGATGGGATTTGAGTGGACAACATCAAAAGTTTTGTGGAATCTCTTCTTCACTTACTTTAGTTTCTTATACTATACTTACTATGGTATGATGACAATGGCCATAACTCCAAACCCACATGTTGCTGGCATATTGTCAACCTCATTCTATGCAATATGGTGCCTTTTCTCAGGCTTCATCATTCCCTTATCTAGAATACCAATATGGTGGAAGTGGTACTATTGGATTTGTCCTGTTGCATGGACCTTAAATGGATTGGTGACTTCCCAATATGGAGACAACATGGACACACTTGAGAATGGTCAAAGGGTTAGAGAATTTGTGATGAGTTACTTTGGTTTTGAACATGACTTCCTAGGAGTGGTTGCAATTGTTGTGGTTGGTTTCTCAGTTTTGTTTGCATTCATCTTCACCTTTGGTATCAAAGCATTCAACTTCCAAAAAAGATGA 4287 0.3877 MRKMESNDTKTWKNHCMEVFSKAKREDDEEALKCVAMKRILTSACFRKNVETKEEGKGKEVDNFMQLELTEKKALLERLVKIAEEDNEKFLLKLKERMDRVGLELPTIEVRFEDINVEAQVYVGSRALPTLLNFFVNVIEGCLNNLQIIPSPKKQLHILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLGKDLKQSGRVTYNGKGLEEFVPQRTSAYISQYDNHIGEMTVRETLAFSARCQGVGQNYEMLTELLRKEKESKIEPDPDINAFMKEAAIEGHQNSVVIDYILKILGLDVCADTMVGDQMIRGISGGERKRLTTGEMLVGPIKVLFMDEISNGLDSSTTFQIINSIKQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEYFESIGFKCPERKGVADFLQEVTSRKDQWQYWARKDEPYNFVTVKDFARAFELFHVGQQLGEEMADSFDKSKFHSNVLITKKYGINKKELLRACTSRELLLMRRNSFVYMFKATQLTYLATLTTTLFLRTKMYHSTIEDAQTYMGALFFTVTVAMFNGISELNMTIMKLPIFYKQRDLLFYPSWAYSLPPWILKIPITLIEVAIWECISYYAIGYDPNIGRFFKQSLVVLCINQMASALFRFMAALGRDIVVANTFGTFSLLAVTVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHGWRKVLPNSNETLGVSILKSRGFFPQAYWYWIGIGALIGYVFLFNFLFALALHYLSPFRKDQAGLSQEKLQERNASTAEEFIQSQTQKSSSDTKMDEAVGENKASSSGRKGMVLPFEPLSLTFDDIRYSVDMPQGMKSQGVCEDRLELLKGISGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYIEGSITVSGYPKNQKAFARISGYCEQFDIHSPNVTVYESLLYSAWLRLSPEVDHATRKMFIEEVMELVELNSLREALVGMPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDSFDELLLLKLGGEQIYAGPIGNQCSDLIQYFEATQGVPKIKDGYNPATWMLEITSARKEANLKVNFTDVYKNSELHRRNKQLIQELSVPSQSSKDLYFDAQYSKTFVAQCLACLWKQHLSYWRNTSYTAVRLLFTIMTGLLFGLIFWGVGSKSKKEQDLFNAMGSMYAAVTFIGVVNGASVQPIVAIERTVFYRERSAGMYSALPYALAQVIIELPHILVQALVYGIIVYAMMGFEWTTSKVLWNLFFTYFSFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVTSQYGDNMDTLENGQRVREFVMSYFGFEHDFLGVVAIVVVGFSVLFAFIFTFGIKAFNFQKR* 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5488 1428 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 7 1428 - -
Mal1g5488 1428 Pfam ABC-transporter N-terminal 68 134 IPR029481 -
Mal1g5488 1428 MobiDBLite consensus disorder prediction 786 803 - -
Mal1g5488 1428 Pfam ABC transporter 859 1011 IPR003439 GO:0005524
Mal1g5488 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 854 1069 IPR027417 -
Mal1g5488 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 416 IPR027417 -
Mal1g5488 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 143 416 IPR003439 GO:0005524
Mal1g5488 1428 SMART AAA_5 168 393 IPR003593 -
Mal1g5488 1428 SMART AAA_5 868 1060 IPR003593 -
Mal1g5488 1428 Pfam ABC transporter 159 342 IPR003439 GO:0005524
Mal1g5488 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 831 1083 IPR003439 GO:0005524
Mal1g5488 1428 Gene3D - 846 1079 IPR027417 -
Mal1g5488 1428 PANTHER ATP-BINDING CASSETTE TRANSPORTER 7 1428 - -
Mal1g5488 1428 MobiDBLite consensus disorder prediction 786 817 - -
Mal1g5488 1428 Pfam ABC-2 type transporter 495 707 IPR013525 GO:0016020|GO:0140359
Mal1g5488 1428 Pfam ABC-2 type transporter 1157 1369 IPR013525 GO:0016020|GO:0140359
Mal1g5488 1428 Pfam ABC-2 type transporter 374 427 IPR043926 GO:0140359
Mal1g5488 1428 Pfam Plant PDR ABC transporter associated 712 773 IPR013581 -
Mal1g5488 1428 Coils Coil 66 86 - -
Mal1g5488 1428 CDD ABCG_PDR_domain2 828 1066 IPR034003 -
Mal1g5488 1428 Gene3D - 143 451 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5488 Mal-Chr1 129903496 129912311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5488 K08711 - gmx:100800368 2358.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0842 2 9730921 9738402 Mal1g5488 1 129903496 129912311 PCT