Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5477 ATGGAGAAAGAAAATGGTGTGAATGTGAGGGTGACTCGAGCAAGGGCTAGAGCTTTCAAGAAATCTTCAAGAAATGAACAAGCTGTTGTTGTTGGACTAACAGATGTGACCAACATTTCTGCAAAATCACATCATAAGCGTATTCATACATCAAATTTTCAGAAGAAAGAATGTTCCAAGAAGAGAAAGACCAATGTAGCTTCTGAAGATGATACCTCCTCACAAGTTTTAACAACCAAAGAGGATGCTAAGACAGAGTTAGCTAAAGATTCTTCAACATCAACAATGACAAAGAAAGAGTCCTTGCAAGTTCAACCTTCTGTGGAAAATCCCCAGCTTTCATTGCAGGACTCTCTTAGCTCTCCAAATACAGACATAAATGTGATATGTGAGAAACTAAGAGCCTCAGTTAGCTTGGGAATTGTGGACATTGATTCAAAGTTAAAGGATTCTCCTATTTGGACTTCTTATGCCCCTGATATATACAATAATATTCATGTCAGAGAGTGTGAAAGAAGGCCATTAGCCAATTACATGGAAAAGTTGCAGCAAGACATCACTCCAAGCATGAGGGGAATTCTGGTTGACTGGCTTGTGGAGGTTGCTGATGAATATAAACTAGTTCCAGACACTCTTTACCTTGCTGTGAATCTCATTGATCGGTTCCTTTCCCAACGTGTGGTTACAAAAAAAAGGCTCCAGTTGCTTGGTGTTACTTGCATGCTAATTTCATCTAAGTATGAAGAGATTTGTGCTCCTGGAGTTAAAGAATTTTGTGTCATCACAGATAATACATACTCCAAACAAGAGGTGTTGAAAATGGAGAAAGAGGTACTAAATCTTCTGCATTTTCAATTAGCTGTTCCCACAATCAAGACATTTCTCAGGAGGTTCATTCAAGTAGCACAAACTTCTTCCAAGGTTGTTTATGCTGAACTTGAATTCCTGGCAAATTACTTAGCAGAGCTTGCACTTGTTGAATACAGCTTCTTGCAGTTCCAACCTTCCAAGATAGCCGCATCTGCGGTTTTTCTTGCCAGATGGACCCTCAGCCAGTCAGAACATCCATGGAATCCAACTCTTGAGTACTATACAAGTTACAAAGCATCAGAGCTGAAAACTACTGTCATTGCACTGGTTGATTTGCAACTTAACAGCAAAGGCTGTGGTCTGACTGCTGTGCGCGAAAAATATAAACAAGAGAAGTTCAAAAGTGTGGCGAATTTGTCTCCGAAACCGGTGGAATCTCTTTTCTAG 1257 0.3994 MEKENGVNVRVTRARARAFKKSSRNEQAVVVGLTDVTNISAKSHHKRIHTSNFQKKECSKKRKTNVASEDDTSSQVLTTKEDAKTELAKDSSTSTMTKKESLQVQPSVENPQLSLQDSLSSPNTDINVICEKLRASVSLGIVDIDSKLKDSPIWTSYAPDIYNNIHVRECERRPLANYMEKLQQDITPSMRGILVDWLVEVADEYKLVPDTLYLAVNLIDRFLSQRVVTKKRLQLLGVTCMLISSKYEEICAPGVKEFCVITDNTYSKQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVVYAELEFLANYLAELALVEYSFLQFQPSKIAASAVFLARWTLSQSEHPWNPTLEYYTSYKASELKTTVIALVDLQLNSKGCGLTAVREKYKQEKFKSVANLSPKPVESLF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5477 418 MobiDBLite consensus disorder prediction 52 68 - -
Mal1g5477 418 MobiDBLite consensus disorder prediction 42 121 - -
Mal1g5477 418 ProSitePatterns Cyclins signature. 191 222 IPR006671 -
Mal1g5477 418 Gene3D - 160 408 - -
Mal1g5477 418 PIRSF Cyclin_A_B_D_E 2 417 IPR039361 -
Mal1g5477 418 CDD CYCLIN 288 380 IPR013763 -
Mal1g5477 418 Pfam Cyclin, C-terminal domain 289 411 IPR004367 -
Mal1g5477 418 PANTHER CYCLINS 25 418 IPR039361 -
Mal1g5477 418 MobiDBLite consensus disorder prediction 89 121 - -
Mal1g5477 418 SMART cyclin_7 293 381 IPR013763 -
Mal1g5477 418 SMART cyclin_7 196 280 IPR013763 -
Mal1g5477 418 Pfam Cyclin, N-terminal domain 160 286 IPR006671 -
Mal1g5477 418 PANTHER CYCLIN-A2-4 25 418 - -
Mal1g5477 418 SUPERFAMILY Cyclin-like 288 411 IPR036915 -
Mal1g5477 418 SMART Cyclin_C_2 289 412 IPR004367 -
Mal1g5477 418 Gene3D - 174 287 - -
Mal1g5477 418 CDD CYCLIN 190 279 IPR013763 -
Mal1g5477 418 SUPERFAMILY Cyclin-like 152 286 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5477 Mal-Chr1 129634679 129639557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5477 8 418 Core Cell Cycle Gene Families AT5G25380 48.936 2.59e-129 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5477 K06627 - gmx:100777132 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5477 1 129634679 129639557 Mal2g0826 2 9574329 9578892 PCT