Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5458 ATGAAAGTGATGAAGGGGAAGCATGTGTATGTGTTAATGGTTACTGCATTAACCATGGTGGTACTGGTAGGAACAACAGCTGCAGCTGATTCAGCACCAAATAACTGCAGTCGCACTTGTGGAGGTAAAGACATTCCATATCCATTTGTCATAGACAACAACGACAACCCTTCATCAGATTATTGTACCTTGGGTGGTAGATTAATTTCGCTCACTTGCAATGAATCCAAAATATACGCGGGGAGCAACTTGGAAGTGTTAAACATAAACATCTCCAAAGCTCAAATCGACGTGTTAGTTTACGTCTCCAAGTATTGCGGTGATGGTAACGATGATAGTAATATAGCCACGCTTGAGAGTGGTTCATATACCATTTCAAGCAAAGAAAACAAGTTTGTAACTATTGGTTATGACAGTTACGGTAAGTTTAATAGTTACCGTTTTGAAAAAAAATATTCAACAGGGTGCTTTTCAAGAACTTTTGGTGATCGAATATGGATAGATGATAGAACATGTTCGGGTAGGGGGTGTTGTCAAGTTGATATTCCTCCTAGTATGTGGAATATAAGTATAGAAGCTTCTAATTTCAACGAAAAATCATCCAAATTTTGTAGCTATTCGTTTGTTGTTAAGAACGATAACTATACTTTTTCATCCACTCATTTATCTCAAGGTTTACCTTTCGAGAAATTACCTGTGGTTCTTGACTGGAGCATTGGTGACATTGATGAAAACTGCAAAACAGCTTCTTCCAAGAATAATGGAGTCAACTATGGGTGCAAGAACAATAGTCATTGTGATGACAAGGGCTTAGATTTTGGTTATCGATGCATATGCAATCCAGGTTTCGAAGGAAATCCTTATGATCCCCATGGCTGCACAGACATTGACGAATGTGCACCAACACAAAATGTTTGCCATGCCAATCAAAAATGTAAGAACACTTATGGGAGTTACAAATGTGTGTGTCCAAAGGGGTATTCCATAGATAGAACAAAGGAAGGAGGTTGCAATGATTCAATAGTACTTATTATTGTCCTTGGAGTAGGAGCAACATTTATAATTCTTTTTGTGGGGACATTCTCCTACTTAATGTACCATAAAAGGAAATTCATCAAATTAAAGGAGAAATTCTTTGAGCAGAATGGTGGTTTGATTTTGAAACAAAAACTCTCGACAAGAGAAGACTCCTCAACTCAAAGTGATAAAATATTCACACAAGATCAGCTAAACAAGGCAACCAAAAACTTCGACGAGAGTTTAATCATTGGCAAAGGTGGTTTTGGTACTGTTTTCAAAGGATTTCTAGATGATAAAAGAATTGTTGCTATCAAAAAATCAAAAATAATAGATAGAAGCCAAATCAATCAATTCATTAATGAGGTTGTTGTTCTCTCTCAAATAAATCATAGGAATGTGGTTAAACTCTTGGGGTGTTGTTTAGAGACAGAAGTTCCTTTGTTGGTTTATGAGTTTGTAAGCAATGGTACTCTTTCTGAATTTATACATACACAAGATAAGACGAATGATTCGACTTGGAAAACTCGTCTTAGGATAGCTGCAGAGGTAGCTGGAGCTCTGTCATATCTGCATTCAGCTGCCTCAATACCAATCATCCATAGAGATGTCAAGAGTGATAACATTCTCTTAGATGGAACCAACACTGCCAAAGTATCAGATTTTGGAGCTTCAAGATTAGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGATCCTGAGTATATGCAAACTAGCCAATTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTAGTTCTTGTGGAGCTGCTAACAGGGGAGAAGCCTTTTAGTTTCAGTAGGCCGGAAGAGAGAAGAAATCTTGCTATGCACTTTTTATCTTGCTTGAAAGAGAATAATGTCTTTGAAGTCATTCAAGATGGTATGTTGAATGAAGAAAACAAAGAAGAGATCAAGGAGGTGACTGTTCTTGCGGCGAAGTGTTTGAGACTTAGAGGGGAAGAAAGACCTAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGGTTAATGGATAAGCACTCTTGGATCAATGATGACTTAAATGTAGAGGAGAGTAAGCACTTGCTTCATGAATCATCATCATCTAGCATTTATGAACCTGGTGATAGCAGCAAACATGGAGATACTGGATACGACAGCCTGAAACAACTTGAACTGATAGTATTGGATAATGGAAGGTGA 2250 0.3787 MKVMKGKHVYVLMVTALTMVVLVGTTAAADSAPNNCSRTCGGKDIPYPFVIDNNDNPSSDYCTLGGRLISLTCNESKIYAGSNLEVLNINISKAQIDVLVYVSKYCGDGNDDSNIATLESGSYTISSKENKFVTIGYDSYGKFNSYRFEKKYSTGCFSRTFGDRIWIDDRTCSGRGCCQVDIPPSMWNISIEASNFNEKSSKFCSYSFVVKNDNYTFSSTHLSQGLPFEKLPVVLDWSIGDIDENCKTASSKNNGVNYGCKNNSHCDDKGLDFGYRCICNPGFEGNPYDPHGCTDIDECAPTQNVCHANQKCKNTYGSYKCVCPKGYSIDRTKEGGCNDSIVLIIVLGVGATFIILFVGTFSYLMYHKRKFIKLKEKFFEQNGGLILKQKLSTREDSSTQSDKIFTQDQLNKATKNFDESLIIGKGGFGTVFKGFLDDKRIVAIKKSKIIDRSQINQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSEFIHTQDKTNDSTWKTRLRIAAEVAGALSYLHSAASIPIIHRDVKSDNILLDGTNTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFSRPEERRNLAMHFLSCLKENNVFEVIQDGMLNEENKEEIKEVTVLAAKCLRLRGEERPSMKEVAMELEGMRLMDKHSWINDDLNVEESKHLLHESSSSSIYEPGDSSKHGDTGYDSLKQLELIVLDNGR* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5458 749 Gene3D Phosphorylase Kinase; domain 1 384 492 - -
Mal1g5458 749 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 717 IPR045274 GO:0007166
Mal1g5458 749 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Mal1g5458 749 CDD EGF_CA 241 285 - -
Mal1g5458 749 ProSiteProfiles EGF-like domain profile. 295 333 IPR000742 -
Mal1g5458 749 Pfam Protein tyrosine and serine/threonine kinase 422 687 IPR001245 GO:0004672|GO:0006468
Mal1g5458 749 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 312 323 IPR000152 -
Mal1g5458 749 Gene3D Laminin 241 297 - -
Mal1g5458 749 SUPERFAMILY Protein kinase-like (PK-like) 399 688 IPR011009 -
Mal1g5458 749 MobiDBLite consensus disorder prediction 714 733 - -
Mal1g5458 749 SMART egf_5 298 338 IPR000742 -
Mal1g5458 749 SMART egf_5 245 294 IPR000742 -
Mal1g5458 749 CDD STKc_IRAK 423 690 - -
Mal1g5458 749 Gene3D Laminin 298 334 - -
Mal1g5458 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Mal1g5458 749 Gene3D Transferase(Phosphotransferase) domain 1 493 710 - -
Mal1g5458 749 SMART serkin_6 417 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5458 749 ProSiteProfiles Protein kinase domain profile. 417 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5458 749 CDD EGF_CA 295 328 - -
Mal1g5458 749 Pfam Calcium-binding EGF domain 295 334 IPR001881 GO:0005509
Mal1g5458 749 SMART egfca_6 241 294 IPR001881 GO:0005509
Mal1g5458 749 SMART egfca_6 295 338 IPR001881 GO:0005509
Mal1g5458 749 Pfam Wall-associated receptor kinase galacturonan-binding 36 98 IPR025287 GO:0030247
Mal1g5458 749 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 717 - -
Mal1g5458 749 SUPERFAMILY EGF/Laminin 288 331 - -
Mal1g5458 749 ProSitePatterns Calcium-binding EGF-like domain signature. 295 321 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5458 Mal-Chr1 129142814 129146178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5458 1 749 Receptor kinase-like Gene Family AT1G21250 43.043 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal1g5458 PK_Tyr_Ser-Thr 2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5458 - - mtr:MTR_1g010260 1043.11