Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5454 ATGAAAGTGATGAAGGGGAAGCATGAGTATGTGTTAATGGTTGCTGCATTAACCATGGTGTTACTGGTAGGAACAACAGCTGCAGCTGATTCAACACCAAATAACTGCAGTCACACTTGTGGAGGTAAAGAAATTCCATATCCATTTGCCATAGATGACAACCCTTCATCAGATTGTTTCTTGGGTCGTAGATTAATTAAGCTCCATTGCATTGAATCCAAAATATACGCGGGAGACTTGGAAGTGTTAAACATAGACATCTTCAAAGCTCAAATCGATGTGTTATTTTACGTCTCCAAGTATTGCGGTGTTGGTAACAAAGATAACAATAAACCAACGCTTAACAGTGGTTCATATACCATTTCAAGCAAAGAAAACAAGTTTGTAACTGTTGGTTATAACAGTTACGGTTATTATAATAGTTACCGTGGTAAAAACAAGTATTCAACAGGTTGCTTAACAAGAACTTTTGGTCGTCAAAGATTGATTGATAATGGAACATGTTCGGGTATAGGGTGTTGTCAAGTTGATATTCCTCCTAAAATGTGGAATATAAGTATAGAAGCTTCTAATTTCAACAAAAATTCATCCGAATTTTGTAGCTACTCATTTGTTGTTAGGAATGGTAACTATACTTTTTCTTCAGCTCATTTATCAAACGGTTTACCTTTCGAGGTATCACCTGTGGTTCTTGACTGGAGCATTGGTAACTTTAGTGAAAACTGCAGTACAGCTTCTTCCATGAATAATGAAGTCAACTATGGGTGCAAGATTAATAGTCATTGTTATGACAACGACACAGATTTTGGTTATCGATGCAGATGCAATTCAGGTTTTGAAGGAAATCCTTATGATCCAAATGGCTGCACAGACATTGACGAATGTGCACCAACACAAAATGTTTGCCATGCCATAGCAAAATGTAAGAACACTAATGGGAAATACACATGTGAGTGTCCAAAGTGGTATTCTGGAGATGGAACAAAGGAAGGAGGTTGCCGTAATTCAATAGTACCTATTATTGTCCTTGGAGTAGGAGCAACATTTATTCTTCTTTTTGTGGGGACATTCTCGTACTTAATATACCACAAGAGGAAATTTATCAAATTGAGAGAGAAATTCTTTGAGCAGAATGGTGGTTTGATTTTGACACAAAAACTCTCCACAAGAGAAGACTCCTCAAGTCAAAGTGCTAAAATATTCACACAAGATCAGCTAAACAAGGCAACCAAAAACTTCGACGAGAGTTTAATCATTGGCAAAGGTGGTTTTGGTACTGTTTTCAAAGGATTTCTAGATAATAATAAAAGAACAGTTGCTATCAAAAAATCAAAAATAATAGATAGAAGCCAAATCAACCAATTCATTAATGAGGTGGTTGTTCTCTCTCAAATAAATCATAGGAATGTGGTTAAACTCTTGGGGTGTTGTTTAGAGACGGAAGTTCCTTTGTTGGTTTATGAATTTGTTACTAACGGAACCCTTTCTGGTTTTATACACACACAAGGTAATAAGGTGAATAACGAAACATGGAAAACTCGTCTTAAGATAGCTGCAGAGGTAGCTGAAGCTCTGTCGTATCTACATTCAGCTGCCTCAATACCAATCATCCATAGAGATGTCAAGAGTGATAACATTCTCTTAGATGGAACCAACACTGCCAAAGTATCAGATTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGATCCTGAGTATATGCAAACTAGCCAATTGACTGAGAAAAGTGATGTATATAGCTTTGGAGTAGTTCTTGTGGAGCTGCTAACAGGGGAGAAGCCTTTTAGTTTCGGTAGGCCAGAAGAGAGAAGAAGTCTTGCTATGCACTTTTTATCTTGCTTGAAAAAGGATAATGTGTTTGAAGTTATTCAAGATGGTATGTTGAATGAAGAAAACAAACAAGAGATCAAGGAGGTAGCAGTTCTTGCGGCGAAGTGTTTGAGACTTAGAGGGGAAGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGGTTAATGAATAAGCACTCTTGGATCAGTGATGACTTAAATGTAGAGGAGAGTAAGCACCTGCTTCATGAATCATCATCTAGCACTTATGAACCTGGTGATAGCAGCAAACATGGAGATATTGGATACGACAGCCTGAAACAACTTGAACTGATAGTATTGGATGATGGAAGGTGA 2241 0.378 MKVMKGKHEYVLMVAALTMVLLVGTTAAADSTPNNCSHTCGGKEIPYPFAIDDNPSSDCFLGRRLIKLHCIESKIYAGDLEVLNIDIFKAQIDVLFYVSKYCGVGNKDNNKPTLNSGSYTISSKENKFVTVGYNSYGYYNSYRGKNKYSTGCLTRTFGRQRLIDNGTCSGIGCCQVDIPPKMWNISIEASNFNKNSSEFCSYSFVVRNGNYTFSSAHLSNGLPFEVSPVVLDWSIGNFSENCSTASSMNNEVNYGCKINSHCYDNDTDFGYRCRCNSGFEGNPYDPNGCTDIDECAPTQNVCHAIAKCKNTNGKYTCECPKWYSGDGTKEGGCRNSIVPIIVLGVGATFILLFVGTFSYLIYHKRKFIKLREKFFEQNGGLILTQKLSTREDSSSQSAKIFTQDQLNKATKNFDESLIIGKGGFGTVFKGFLDNNKRTVAIKKSKIIDRSQINQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVTNGTLSGFIHTQGNKVNNETWKTRLKIAAEVAEALSYLHSAASIPIIHRDVKSDNILLDGTNTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFGRPEERRSLAMHFLSCLKKDNVFEVIQDGMLNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMNKHSWISDDLNVEESKHLLHESSSSTYEPGDSSKHGDIGYDSLKQLELIVLDDGR* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5454 746 ProSiteProfiles EGF-like domain profile. 291 329 IPR000742 -
Mal1g5454 746 SUPERFAMILY EGF/Laminin 291 326 - -
Mal1g5454 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 18 715 - -
Mal1g5454 746 ProSiteProfiles Protein kinase domain profile. 413 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5454 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Mal1g5454 746 Gene3D Transferase(Phosphotransferase) domain 1 490 708 - -
Mal1g5454 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 715 IPR045274 GO:0007166
Mal1g5454 746 Pfam Protein tyrosine and serine/threonine kinase 418 685 IPR001245 GO:0004672|GO:0006468
Mal1g5454 746 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Mal1g5454 746 SMART egfca_6 291 334 IPR001881 GO:0005509
Mal1g5454 746 CDD STKc_IRAK 419 688 - -
Mal1g5454 746 ProSitePatterns Protein kinases ATP-binding region signature. 419 443 IPR017441 GO:0005524
Mal1g5454 746 ProSitePatterns Calcium-binding EGF-like domain signature. 291 317 IPR018097 GO:0005509
Mal1g5454 746 SMART serkin_6 413 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5454 746 SMART egf_5 294 334 IPR000742 -
Mal1g5454 746 SMART egf_5 241 290 IPR000742 -
Mal1g5454 746 Gene3D Laminin 239 333 - -
Mal1g5454 746 Gene3D Phosphorylase Kinase; domain 1 397 489 - -
Mal1g5454 746 Pfam Calcium-binding EGF domain 291 331 IPR001881 GO:0005509
Mal1g5454 746 SUPERFAMILY Protein kinase-like (PK-like) 394 686 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5454 Mal-Chr1 129056027 129058699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5454 1 746 Receptor kinase-like Gene Family AT1G21250 43.523 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal1g5454 PK_Tyr_Ser-Thr 3.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5454 - - mtr:MTR_1g010260 1116.29