Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5453 ATGTCTCTGTTGGTAGAAGCAGTTGCATCTGATCAACCTCGACAAGTCCTACCTGGCTGCAATTACACTTGCGGAGATGTAAAAATTCCATATCCATTTGGCATAGGAACTTCAACAACACAAGATCATACACCATGTTACATGGATTCAAAATTTAACCTCACTTGTGTAAACAACTCCAAATTAATCCATGGCAAGAATATCCAAGTCCTAGACATAAATCCCCTAGGTCAAATGGTCATGCAATTTTTCGTCTCGCGTCTTTGTCCTAGTAGTAGTAGTAATAATAATAATACCGGAGAAGCGAATATGCCTTTTCTCCGAGTTCCTTCTTTTACAATTTCAAGCATGGAAAACAAATTCATAACCGTTGGTTGCGACAGTTATGGATATCTCAACAGTAATTACAAGGGTGCTACATATTCAACAGGATGCTTAACAAGATGTTATGATTTTGATCCTAAAATGGTTATTGGAAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAGTTGATATTCCTCCACTTATGAAAAATATTACTATAGAAACATTTAAATTCCCAACTTCTACACTATCTGATTCTAAGGAACATTGTAGCAATTCTTTTATTGCAAAACAAGGATCTTATAATTTTTCTGTACAACATATAGAGGAACTACCTAATAAAACTTTCCCCTTGGTTGTTAATTGGGCTGTTACAAGTGAATCGTGTGAAATAGCCCAAACTACAAATAACTATGCCTGCAAAGAAAATAGTGAATGTGTTGATAAAGATTCAGATTACGACGGTTACAGATGCAAGTGTTTGGCAGGTTTTGAAGGAAATCCATACGTTCCCGGAGGCTGCACAGACATTAACGAATGTGAGACATCAAATCATACATGCAAAAGTAAATCAAATTGTAATAACACTATTGGGAATTACACTTGTTTCTGTCCCGTGGGGGAAACCGGAGATGGAACAAAGGAAGGAGGGTGCCAACTACGTCGTGAAAATGCAAATCCTATAGTACTACCTACTGTCCTTGGGGCAGGAGGAGTATTTATTATTCTATTTGTGGGGATAGTTTTCTTCTTAATATACCAAAAAAGGAAATTTATCAAATTGAAAGAGAAATTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGACTCATCTCAAGTAGCTCATATTTTCAAAGAAAATGAACTAAGGAAAGCCACTAACAACTATGATGAGAGCTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGAACTAGCAGATAATAGAATTGTTGCTATCAAAAAGTCCAAAACTATAGATGAAAGCCAAATTGAACAATTCATCAATGAGGTGGATGTTGTCTCTCAAATAAATCACAGGAATGTGGTTAAACTTTTGGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAGTTTGTTAGCAATGGTACTCTTTCTGAATTTATACACACACAAGGTAAGACGAACGATCCAACTTGGAAAACTCGTCTTAGGATAGCCGCAGAGGTAGCTGGAGCTCTGTCATATCTGCATTCAGCTGCCTCAATACCTATTATCCATAGAGATGTCAAGAGCGATAACATTCTATTAGATGGAACCAACACTGCCAAAGTATCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGATCCTGAGTATATGCAAACAAGCCAATTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTAGTTCTTGTCGAGTTGCTAACAGGGGAGAAGCCTTTTAGTTTCGGTAGGCCGGAGGAGAGAAGAAGTCTTGCTATGCACTTTTTATCTTGCTTGAAAAAGGATAATGTGTTTGAAGTCATTCAAGATAGTATGTTGAATGAAGAAAACAAAGAAGAGATCAAGGAGGTAGCTGTTCTTGCGGCGAAGTGCTTGCGACTTAGAGGGGAGGAAAGGCCAAGCATGAAGGAAGTGACTATGGAATTGGAGGGAATGAGGTTAATGAATAAGCACTCTTGGATCAATGATGACTCAAATGTTGAGGAGAGTCAATACTTGCTTCATGAATCATCATCTACTATTTATGAACATGGTGATAGCAGCACACATGGAGATATTGGGTATGACAGTTTGAAAGATCATGTGTTGATTGCCTTGGATGATGGAAGATGA 2238 0.3776 MSLLVEAVASDQPRQVLPGCNYTCGDVKIPYPFGIGTSTTQDHTPCYMDSKFNLTCVNNSKLIHGKNIQVLDINPLGQMVMQFFVSRLCPSSSSNNNNTGEANMPFLRVPSFTISSMENKFITVGCDSYGYLNSNYKGATYSTGCLTRCYDFDPKMVIGNNTGKCTGLGCCQVDIPPLMKNITIETFKFPTSTLSDSKEHCSNSFIAKQGSYNFSVQHIEELPNKTFPLVVNWAVTSESCEIAQTTNNYACKENSECVDKDSDYDGYRCKCLAGFEGNPYVPGGCTDINECETSNHTCKSKSNCNNTIGNYTCFCPVGETGDGTKEGGCQLRRENANPIVLPTVLGAGGVFIILFVGIVFFLIYQKRKFIKLKEKFFRQNGGSILEQKLLQRKDSSQVAHIFKENELRKATNNYDESLIIGRGGFGTVFKGELADNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSEFIHTQGKTNDPTWKTRLRIAAEVAGALSYLHSAASIPIIHRDVKSDNILLDGTNTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFGRPEERRSLAMHFLSCLKKDNVFEVIQDSMLNEENKEEIKEVAVLAAKCLRLRGEERPSMKEVTMELEGMRLMNKHSWINDDSNVEESQYLLHESSSTIYEHGDSSTHGDIGYDSLKDHVLIALDDGR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5453 745 Pfam Wall-associated receptor kinase galacturonan-binding 20 78 IPR025287 GO:0030247
Mal1g5453 745 ProSitePatterns Calcium-binding EGF-like domain signature. 287 313 IPR018097 GO:0005509
Mal1g5453 745 Pfam Protein tyrosine and serine/threonine kinase 420 684 IPR001245 GO:0004672|GO:0006468
Mal1g5453 745 SMART egf_5 290 330 IPR000742 -
Mal1g5453 745 SMART egf_5 239 286 IPR000742 -
Mal1g5453 745 Gene3D Phosphorylase Kinase; domain 1 379 489 - -
Mal1g5453 745 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Mal1g5453 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 7 714 IPR045274 GO:0007166
Mal1g5453 745 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Mal1g5453 745 SMART serkin_6 414 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5453 745 Gene3D Laminin 238 329 - -
Mal1g5453 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Mal1g5453 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 7 714 - -
Mal1g5453 745 SMART egfca_6 287 330 IPR001881 GO:0005509
Mal1g5453 745 Gene3D Transferase(Phosphotransferase) domain 1 490 710 - -
Mal1g5453 745 Pfam Calcium-binding EGF domain 287 320 IPR001881 GO:0005509
Mal1g5453 745 SUPERFAMILY Protein kinase-like (PK-like) 396 685 IPR011009 -
Mal1g5453 745 ProSiteProfiles Protein kinase domain profile. 414 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5453 745 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Mal1g5453 745 SUPERFAMILY EGF/Laminin 287 322 - -
Mal1g5453 745 CDD STKc_IRAK 420 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5453 Mal-Chr1 129009856 129012509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5453 12 745 Receptor kinase-like Gene Family AT1G21230 45.235 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal1g5453 PK_Tyr_Ser-Thr 2.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5453 - - gsj:114381577 922.539