Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5452 ATGAAAATGAAGGAGATTCAAGTGTTAATAATGTTTGCTACCTTAGCCCTGTTGGTAGAAGCAGTTGCATCTGATCAACCTCGACAAGTCCTACCTGGCTGTAATTACACTTGCGGAGATGTAAAAATTCCATATCCATTTGGCATAGGAAATTCAACACAACAAGATGACACACCATGTTACATGGATTCAAAATTTAAACTCACTTGTGTAAACAACACCAAATTAATCCGTGGTAAGAATATCCAAGTCCTAGACATAAATCCCCAAGGTCAAATGGTCATGCAATTTTTCGTGTCACATCTTTGTACAAATAGTAGTAGTAATAATACTAAAGAAGCAAATATACCTTTTCTCAGAATTCCTTCTCTCCAAATTTCAAGCACAGAAAACAAATTCATAACCGTTGGTTGCGACAGTTACGGATATCTCAACAGTAATTTCAAGGGTGCCACTTATTCAACAGGGTGCTTAACAAGATGTCATCATTTTGATCCAAAAATAGTGGTTGGGAATAACACTGGAAAATGCACAGGATTAGGTTGTTGCCAAGTGGATATTCCTCCTAGTATGAGAAATATCACTATACAAACGTTTAAATTCCCAACTTCTACACTATCGGAGGAAAATTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAAGTTTTCTGTTGACCATATATATAACCTACCTAATAAAACTTTCCCCGTAGTTATAAATTGGGCTGTTACAAATGAATCATGTGAAATAGCCCAAACTACAAATAACTATGCCTGCAAGGAAAATAGTGAATGTGTTGATGAAGATTCAGATTATGACGGTTACAGATGCAAGTGTTTGGAAGGTTTTGAAGGAAATCCATACCTTCCCGGAGGCTGCACAGACATTAATGAATGTGCGACATCAAATCATACATGCAAAAGTAAATCAAATTGTAATAACACTATTGGGAATTACACTTGTTTCTGTCCCGTGGAGGAAACCGGAGATGGAACAAAGGAAGGAGGGTGCCAACTACGTCGTGGAAATGCAAATCCAATAGTACTACCTACTGTCCTTGGGGCAGGAGGAGTATTTATTATTCTATTTGTGGGGATAGTTTTCTTCTTAATATACCAAAAAAGGAAATTTATCAAATTGAAAGAGAAATTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAGAAACTTCTTCAAAGAAAAGACTCATCTCAAGTAGCTCATATTTTCAAAGAAAATGAACTAAGGAAAGCCACTAACAACTATGATGAGAGCTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGAACTAGCAGATAATAGAATTGTTGCTATCAAAAAGTCCAAAACTATAGATGAAAGCCAAATTGAACAATTCATCAATGAGGTGGATGTTGTCTCTCAAATAAATCACAGGAATGTGGTTAAACTTTTGGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAGTTTGTTAGCAATGGTACTCTTTCTGAATTTATACACACACAAGGTAAGACGAACGATCCAACTTGGAAAACTCGTCTTAGGATAGCCGCAGAGGTAGCTGGAGCTCTGTCATATCTGCATTCAGCTGCCTCAATACCTATTATCCATAGAGATGTCAAGAGCGATAACATTCTATTAGATGGAACCAACACTGCCAAAGTATCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGATCCTGAGTATATGCAAACAAGCCAATTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTAGTTCTTGTCGAGTTGCTAACAGGGGAGAAGCCTTTTAGTTTCGGTAGGCCGGAGGAGAGAAGAAGTCTTGCTATGCACTTTTTATCTTGCTTGAAAAAGGATAATGTGTTTGAAGTTATTCAAGATAGTATGTTGAATGAAGAAAACAAAGAAGAGATCAAGGAGGTAGCAGTTCTTGCGGCGAAGTGCTTGCGACTTAGAGGGGATGAAAGGCCAAGCATGAAGGAAGTGACTATGGAATTGGAGGGAATGAGGTTAATGAATAAGCACTCTTGGATCAATGATGACTCAAATGTTGAGGAGAGTCAATACTTGCTTCATGAATCATCATCTACTATTTATGAACATGGTGATAGCAGCACACATGGAGATATTGGGTATGACAGTTTGAAAGATCATGTGTTGATTGCCTTGGATGATGGAAGATGA 2268 0.3761 MKMKEIQVLIMFATLALLVEAVASDQPRQVLPGCNYTCGDVKIPYPFGIGNSTQQDDTPCYMDSKFKLTCVNNTKLIRGKNIQVLDINPQGQMVMQFFVSHLCTNSSSNNTKEANIPFLRIPSLQISSTENKFITVGCDSYGYLNSNFKGATYSTGCLTRCHHFDPKIVVGNNTGKCTGLGCCQVDIPPSMRNITIQTFKFPTSTLSEENCSYSFIAKQGSYKFSVDHIYNLPNKTFPVVINWAVTNESCEIAQTTNNYACKENSECVDEDSDYDGYRCKCLEGFEGNPYLPGGCTDINECATSNHTCKSKSNCNNTIGNYTCFCPVEETGDGTKEGGCQLRRGNANPIVLPTVLGAGGVFIILFVGIVFFLIYQKRKFIKLKEKFFRQNGGSILEQKLLQRKDSSQVAHIFKENELRKATNNYDESLIIGRGGFGTVFKGELADNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSEFIHTQGKTNDPTWKTRLRIAAEVAGALSYLHSAASIPIIHRDVKSDNILLDGTNTAKVSDFGASRLVPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFSFGRPEERRSLAMHFLSCLKKDNVFEVIQDSMLNEENKEEIKEVAVLAAKCLRLRGDERPSMKEVTMELEGMRLMNKHSWINDDSNVEESQYLLHESSSTIYEHGDSSTHGDIGYDSLKDHVLIALDDGR* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5452 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 314 325 IPR000152 -
Mal1g5452 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Mal1g5452 755 Gene3D Laminin 247 339 - -
Mal1g5452 755 ProSiteProfiles Protein kinase domain profile. 424 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5452 755 Gene3D Transferase(Phosphotransferase) domain 1 500 720 - -
Mal1g5452 755 Pfam Protein tyrosine and serine/threonine kinase 430 694 IPR001245 GO:0004672|GO:0006468
Mal1g5452 755 Pfam Wall-associated receptor kinase galacturonan-binding 34 93 IPR025287 GO:0030247
Mal1g5452 755 Gene3D Phosphorylase Kinase; domain 1 389 499 - -
Mal1g5452 755 Pfam Calcium-binding EGF domain 297 327 IPR001881 GO:0005509
Mal1g5452 755 ProSitePatterns Calcium-binding EGF-like domain signature. 297 323 IPR018097 GO:0005509
Mal1g5452 755 SMART serkin_6 424 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5452 755 SUPERFAMILY EGF/Laminin 297 332 - -
Mal1g5452 755 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Mal1g5452 755 SUPERFAMILY Protein kinase-like (PK-like) 406 695 IPR011009 -
Mal1g5452 755 SMART egf_5 249 296 IPR000742 -
Mal1g5452 755 SMART egf_5 300 340 IPR000742 -
Mal1g5452 755 SMART egfca_6 297 340 IPR001881 GO:0005509
Mal1g5452 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 17 724 - -
Mal1g5452 755 CDD STKc_IRAK 430 697 - -
Mal1g5452 755 ProSiteProfiles EGF-like domain profile. 297 335 IPR000742 -
Mal1g5452 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 724 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5452 Mal-Chr1 129000654 129003118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5452 1 755 Receptor kinase-like Gene Family AT1G21230 45.325 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal1g5452 PK_Tyr_Ser-Thr 4.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5452 - - gsj:114381577 930.628