Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5441 ATGGCAACAGATATCAGTTTGGAAGGAGATATTGCGAGTGTTCAACCAGTTGAAGATCATGACAGCAAGCAAGATTCAGAGAAGAGCAAGGACAAAGATAAAACCACCAATACAGTACCCTTATACAAGCTTTTCTCATTTGCTGATCCTTTTGATTGTTTATTGATGCTTATGGGGACTGTAGGTGCTATTGGGAATGGAATCTCTATACCCTTGATGGTTTTAATATTTGGAAATATGATCAATGCTTTTGGATATTCCACAAACTCAAAAGTTGTTGATGAAGTCTCTAAGGTGTCTCTGAAATTTGTATACTTTGCTGCGGGTACCTTTGTTGCGTCATTTTTGCAGTTAAGTTGCTGGATGATCACCGGGGAGAGACAGAGTGCAAGAATTAGAGGGTTATACCTTAAAACAATTTTGAGGCAAGATGTGAGCTTCTTTGATATGGAAACTAATACAGGAGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTAAAGATGCCTTGGGGGAGAAGGTTGGACAGTTTATACAGTGTTTGGCAACTTTCATAGGAGCTTTTGTCATATCATTCACTAAGGGATGGCTTCTAACTGTTGTCATGCTATCTAGTATACCAGTTGTAGTGTTGTCTGGTGCTATGATGAGTTTGGTTATTGCAAAAGCATCATCAACTGGACAGGCAGCTTATTCTAAATCAGCAAGTGTAGTTGAGCAGACAATAGGTTCCATCCGAACTGTTGCATCATTCACTGGGGAGAACCAAGCTATAACTAAATATAATCAGTCCTTAATCAAGATTTACAATACTTCAGTGCAAGAGGCACTAGCATCTGGTGTGGGGTTTGCTACACTCTTATTTGTTTTTATCTCCAGTTATGGTTTGGCTGTTTGGTTTGGTGGGAAATTGATTATAGAGAAAGGATATACAGGTGGGGATGTTATGACTGTAATTTTTGCTGTATTGACTGGTTCAATGAGTCTCGGGCAAACATCTCCAAGCCTAAGTGCTTTTGCTGCAGGACGAGCTGCAGCCTTTAAGATGTTGGAAACGATTAAAAGGAAGCCGGAAATTGATGCTTATGACATTAGTGGGAAAAAGCTTGATGACATTCGTGGAGACATAGAGCTCAGGAATGTTTGCTTTAGTTATCCTACACGATCAGGTGAACTGATATTCAATGGATTCTCTCTTTCATTACCTAGCGGCACTACTGCAGCTTTGGTAGGGCAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTCTATGATCCAACGGATGGTGAAATTCTCATTGATGGTATCAACCTCAAAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTAGTCAGCCAGGAACCCGTTCTCTTTACTTGTAGCATTAAGGAGAATATTGCCTATGGCAAGGACGGTGCAACTGATGAAGAAATCAGAGTTGCAGCAGAACTTGCTAATGCTTCCAAATTTATAGATAAACTTCCTCAGGGACTTGACACAATGGTTGGTGAGCATGGAGCACAGCTCTCTGGAGGTCAAAAGCAAAGAGTTGCAATTGCCAGAGCAATTTTGAAAGACCCAAGAATCCTACTTCTTGATGAAGCTACAAGTGCCCTTGATGCAAAATCTGAGAGAATTGTACAAGAGGCATTGAACAGAATAATGATAAACCGGACGACTATTGTTGTAGCTCACCGCTTAAGTACAATAAGAAATGTTGACACCATTGCTGTCATTCATCAAGGAAAAATAGTTGAAAGAGGTTCACATACTGAGCTCACCAAGGATACTAATGGAGCCTATAGCCAACTTATTAGTCTGCAAGAAATGAAGGTGTCAGAGCAGAATGATGCAAATGACAACACTATGTCAGTGCATTCTGGAAGACAATCAAGTCAGAAATCTTTTTCTGTAAGATCTATAAGCCAAGGGTCATCTGGAAACAGCGGTCGTCACTCTTTCTCAGCATCATATGTTGCACCCACAACAGATGGCTTCTTAGAAACTGCCCATGGTGGACCTCAAGCTTTTCCTTCAACAGTTTCTTCACCACCAGAAGTGCCACTTTATCGCCTGGCATATCTTAACAAGCCTGAGATTGCGGTCATATTGATGGGGACTATAGCTGCAGTGCTGCAAGGAGCAATAATGCCCATTTTTGGGATCTTGATTTCTAAAATGATAAGTATTTTCTACAAACCAGCTGATGAACTTCGTCATGATTCAAAAGTTTGGGCAATAGTGTTTGTGGCGGTTGCTGTGACAACATTACTCGTTATTCCATGTAGATTCTACTTCTTTGGCGTTGCTGGAGGTAAGTTGATCCAAAGGATCCGGAATATGTGTTTTGAGAAAGTAGTTCACATGGAAGTAAGTTGGTTTGATGAGGCTGAGCATTCAAGCGGAGCACTTGGAGCAAGGCTCTCCACTGATGCAGCTTCAGTTAGAGCTCTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATATTGCTACAGCAATAGCTGGCTTGGTAATTTCTTTTCAAGCGAGCTGGCAGCTTGCGTTCATAGTCCTTGCTTTGGCTCCTCTATTAGGACTAAGTGGATTTGTACAAGTAAAGGTCTTGAAAGGATTTAGCGCAGATGCAAAGAAATTGTATGAAGAAGCAAGTCAGGTGGCAAATGATGCTGTAGGGAGTATAAGAACGGTTGCTTCTTTTTGTGCTGAAGAGAAGGTGAATGAATTATATAAGCAAAAATGTGAGGGACCAATTAAGAAAGGCGTAAGGCGAGGGATAATAAGTGGATTTGGTTTTGGGTTATCATTCTTCATGCTGTATGCAGTTTATGCCTGCTGTTTCTATGCTGGAGCTCGACTCGTAGAGGATGGCAAATCTACATTCTCAGATGTTTTCCTTGTCTTTTTTGCACTCAGCATGGCAGCTATGGGAGTCTCTGAATCTGGGAGCTTGCTCCCTAATTCAACTAATGCAAAAAGTGCTACTGCTTCCATATTTGCTATTCTTGATCAGAAGTCACAAATAGACCCTAGTGATGAATCTGGCATGACACTGGAAGAAGTCAAGGGAGAAATTGAGTTTAGCCATATTAATTTCAAGTATCCTACTAGACCTGATGTTCAAATATTTGTAGATCTTTGCTTGAATATCCAAAGCGGAAAGACAGTTGCACTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTACTACAAAGATTCTATGACCCTGACTCAGGACACATTACTCTTGATGGAATAGAAATTCAAAGAATGCAGGTGAAATGGCTAAGACAACAGATGGGACTAGTAAGCCAAGAGCCTGTTCTTTTCAATGACACGGTTCGAGCCAATATTGCATACGGAAAAGGAGGAGATGCAACAGAAGCAGAAATAGTAGCTGCAGCAGAACTAGCAAATGCTCACCAGTTCATTAGTAGTTTGCAGAGGGGCTATGACACAATAGTAGGCGAGAGAGGAATTCAATTATCTGGGGGACAGAAGCAGCGTGTGGCAATCGCACGAGCTATAGTGAAGAATCCAAAAATACTATTACTAGATGAAGCAACTAGTGCACTTGATGCTGAGTCTGAAAAAGTTGTACAAGATGCACTTGACTGTGTTATGGTGGAGCGAACGACAATAATAGTAGCTCATAGGTTATCGACTATAAAGGGTGCAGATTTAATTGCAGTAGTTAAGAATGGTGCGATAGCAGAGAAAGGAAAACATGAAGCATTGCTCCACAAGGGTGGTGACTATGCTTCCTTAGTGGCATTGCACATGCACACAGTTGCTTCTTCATCTTAG 3840 0.4117 MATDISLEGDIASVQPVEDHDSKQDSEKSKDKDKTTNTVPLYKLFSFADPFDCLLMLMGTVGAIGNGISIPLMVLIFGNMINAFGYSTNSKVVDEVSKVSLKFVYFAAGTFVASFLQLSCWMITGERQSARIRGLYLKTILRQDVSFFDMETNTGEVVGRMSGDTVLIKDALGEKVGQFIQCLATFIGAFVISFTKGWLLTVVMLSSIPVVVLSGAMMSLVIAKASSTGQAAYSKSASVVEQTIGSIRTVASFTGENQAITKYNQSLIKIYNTSVQEALASGVGFATLLFVFISSYGLAVWFGGKLIIEKGYTGGDVMTVIFAVLTGSMSLGQTSPSLSAFAAGRAAAFKMLETIKRKPEIDAYDISGKKLDDIRGDIELRNVCFSYPTRSGELIFNGFSLSLPSGTTAALVGQSGSGKSTVVSLIERFYDPTDGEILIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRVAAELANASKFIDKLPQGLDTMVGEHGAQLSGGQKQRVAIARAILKDPRILLLDEATSALDAKSERIVQEALNRIMINRTTIVVAHRLSTIRNVDTIAVIHQGKIVERGSHTELTKDTNGAYSQLISLQEMKVSEQNDANDNTMSVHSGRQSSQKSFSVRSISQGSSGNSGRHSFSASYVAPTTDGFLETAHGGPQAFPSTVSSPPEVPLYRLAYLNKPEIAVILMGTIAAVLQGAIMPIFGILISKMISIFYKPADELRHDSKVWAIVFVAVAVTTLLVIPCRFYFFGVAGGKLIQRIRNMCFEKVVHMEVSWFDEAEHSSGALGARLSTDAASVRALVGDALGLLVQNIATAIAGLVISFQASWQLAFIVLALAPLLGLSGFVQVKVLKGFSADAKKLYEEASQVANDAVGSIRTVASFCAEEKVNELYKQKCEGPIKKGVRRGIISGFGFGLSFFMLYAVYACCFYAGARLVEDGKSTFSDVFLVFFALSMAAMGVSESGSLLPNSTNAKSATASIFAILDQKSQIDPSDESGMTLEEVKGEIEFSHINFKYPTRPDVQIFVDLCLNIQSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGIEIQRMQVKWLRQQMGLVSQEPVLFNDTVRANIAYGKGGDATEAEIVAAAELANAHQFISSLQRGYDTIVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDCVMVERTTIIVAHRLSTIKGADLIAVVKNGAIAEKGKHEALLHKGGDYASLVALHMHTVASSS* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5441 1279 Gene3D - 1023 1272 IPR027417 -
Mal1g5441 1279 Gene3D - 368 617 IPR027417 -
Mal1g5441 1279 CDD ABC_6TM_Pgp_ABCB1_D1_like 56 339 - -
Mal1g5441 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 712 998 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g5441 1279 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 22 1274 - -
Mal1g5441 1279 ProSitePatterns ABC transporters family signature. 517 531 IPR017871 GO:0005524
Mal1g5441 1279 PANTHER - 22 1274 - -
Mal1g5441 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1022 1270 IPR027417 -
Mal1g5441 1279 Gene3D ABC transporter type 1, transmembrane domain 1000 1022 IPR036640 GO:0005524|GO:0016021
Mal1g5441 1279 Gene3D ABC transporter type 1, transmembrane domain 693 999 IPR036640 GO:0005524|GO:0016021
Mal1g5441 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 616 IPR027417 -
Mal1g5441 1279 ProSitePatterns ABC transporters family signature. 1173 1187 IPR017871 GO:0005524
Mal1g5441 1279 SUPERFAMILY ABC transporter transmembrane region 43 362 IPR036640 GO:0005524|GO:0016021
Mal1g5441 1279 Pfam ABC transporter 1054 1201 IPR003439 GO:0005524
Mal1g5441 1279 MobiDBLite consensus disorder prediction 624 662 - -
Mal1g5441 1279 CDD ABC_6TM_Pgp_ABCB1_D2_like 701 1016 - -
Mal1g5441 1279 CDD ABC_MTABC3_MDL1_MDL2 378 616 - -
Mal1g5441 1279 MobiDBLite consensus disorder prediction 14 34 - -
Mal1g5441 1279 SMART AAA_5 405 591 IPR003593 -
Mal1g5441 1279 SMART AAA_5 1060 1253 IPR003593 -
Mal1g5441 1279 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1033 1270 IPR003439 GO:0005524
Mal1g5441 1279 SUPERFAMILY ABC transporter transmembrane region 699 1017 IPR036640 GO:0005524|GO:0016021
Mal1g5441 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 57 343 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g5441 1279 CDD ABC_MTABC3_MDL1_MDL2 1033 1268 - -
Mal1g5441 1279 Pfam ABC transporter transmembrane region 56 329 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g5441 1279 Pfam ABC transporter transmembrane region 712 983 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g5441 1279 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 378 614 IPR003439 GO:0005524
Mal1g5441 1279 Pfam ABC transporter 397 545 IPR003439 GO:0005524
Mal1g5441 1279 Gene3D ABC transporter type 1, transmembrane domain 43 626 IPR036640 GO:0005524|GO:0016021
Mal1g5441 1279 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5441 Mal-Chr1 128815479 128821093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5441 39 1274 Calmodulin-binding Proteins AT2G36910 43.785 0.0 1031