Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5412 ATGTTCAACAATTCCCAATTCGATGCCTCCAACGCCTTCTCCGGCGGCGGATTCATGTCATTGCAACAAAACGATTCTGCTTCTCCGGCACCGACTAAAAGTCGTGATTCTCAGGGTTTGGTTCCGGTTACGGTGAAGCAGATAAGTGAAGCTTCTCATTCTGGTGATGAAAAGTCCAATTTCTCAATCAACGGTGTAGATCTGACTAATGTGACATTGGTTGGAATGGTGTATGAGAAAGTTGAGAGGAACACTGATGTTAATTTTGTTTTGGATGATGGAACTGGACGGATCAAATGCCGAAGATGGGTCAATGATACTTTTGACACTAAGGAAATGGAGGAAGTATTGAATGGCATGTATGTTCGTGTTTATGGGCACTTGAAAAGCTTTCAAGGTGTAAGGCAACTCATTGCCTTCTCTGTCAGGCCCGTGACAAATTTTGATGAGATCCCTTTTCACTTCATTGACTGCATTCATAACTACCTCCGCAGCAAACTGAAGATGGAAGGAATCTCTTCTGCACTTCCTTCATCAAACTCGTCTATGAACACTCCTGTCAAAAATGTATCAAATGTATCTCAGGCACCATCATCAAATCCGGGATTTGCACAATATAGCACTGATGGACCCAAGGATTGCAATACATTGATCCTTAACTATCTGCAGCAGCATTCAGACCAGTCAGATAGGGGAATTCATGTTGATGAACTATCAAAAGAACTCAAGCTTCCATTGGACAAGATCAAAATGTCGCTGAAGTATCTTGAAGAAGAAGGTGAAGTATACTCCACCACAGATGATTCCCACTACAAACCCTCTTGTACTTGA 831 0.4224 MFNNSQFDASNAFSGGGFMSLQQNDSASPAPTKSRDSQGLVPVTVKQISEASHSGDEKSNFSINGVDLTNVTLVGMVYEKVERNTDVNFVLDDGTGRIKCRRWVNDTFDTKEMEEVLNGMYVRVYGHLKSFQGVRQLIAFSVRPVTNFDEIPFHFIDCIHNYLRSKLKMEGISSALPSSNSSMNTPVKNVSNVSQAPSSNPGFAQYSTDGPKDCNTLILNYLQQHSDQSDRGIHVDELSKELKLPLDKIKMSLKYLEEEGEVYSTTDDSHYKPSCT* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5412 276 Pfam Replication protein A C terminal 181 268 IPR014892 -
Mal1g5412 276 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 273 - -
Mal1g5412 276 MobiDBLite consensus disorder prediction 18 40 - -
Mal1g5412 276 CDD RPA2_DBD_D 70 163 - -
Mal1g5412 276 PANTHER REPLICATION PROTEIN A-RELATED 1 273 IPR040260 -
Mal1g5412 276 PIRSF RPA32 1 274 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal1g5412 276 SUPERFAMILY Nucleic acid-binding proteins 40 164 IPR012340 -
Mal1g5412 276 Pfam OB-fold nucleic acid binding domain 71 143 IPR004365 GO:0003676
Mal1g5412 276 Gene3D - 32 166 IPR012340 -
Mal1g5412 276 Gene3D - 206 274 IPR036388 -
Mal1g5412 276 SUPERFAMILY "Winged helix" DNA-binding domain 209 272 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5412 Mal-Chr1 128406222 128410812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5412 1 272 Core DNA Replication Machinery Family AT2G24490 47.842 1.65e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5412 K10739 - gmx:100802512 423.705