Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5405 ATGATTATATTAGATAAATTCAATGAATCTAACAGTATAATTCTCCATCCGCTGGAAAATGGCCGAGTTGATGAGCACAGAACTAATAATGACACTCAAACCAAGTTCAGTGACGAGAAATATGAAATTGTCAAGAGGCTGCAAGAGAAGAAGCATATATGTGTAATGACAGAAGATGGTGTAAATGACACCCCGGCGCTAAAGAAAGCAGATATCGGAATTTCTATCGTTGATACTACAGATTCTGCTAGAAGTGCTTCTGATATTGTCCTCACCAAACCTGGTCTTAGTGTCATTATCAGTGCTGTGCAGGGCAATTTTCCAGAGAATGAAGAATTATACTGTTAG 348 0.3822 MIILDKFNESNSIILHPLENGRVDEHRTNNDTQTKFSDEKYEIVKRLQEKKHICVMTEDGVNDTPALKKADIGISIVDTTDSARSASDIVLTKPGLSVIISAVQGNFPENEELYC* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5405 115 Gene3D - 95 104 - -
Mal1g5405 115 PRINTS H+-transporting ATPase (proton pump) signature 88 113 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal1g5405 115 PRINTS H+-transporting ATPase (proton pump) signature 57 73 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal1g5405 115 PRINTS H+-transporting ATPase (proton pump) signature 29 45 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal1g5405 115 Pfam haloacid dehalogenase-like hydrolase 38 71 - -
Mal1g5405 115 SUPERFAMILY HAD-like 36 103 IPR036412 -
Mal1g5405 115 PRINTS P-type cation-transporting ATPase superfamily signature 57 76 - -
Mal1g5405 115 PRINTS P-type cation-transporting ATPase superfamily signature 80 92 - -
Mal1g5405 115 PANTHER ATPASE 5, PLASMA MEMBRANE-TYPE 36 103 - -
Mal1g5405 115 Gene3D - 38 94 IPR023214 -
Mal1g5405 115 PANTHER CALCIUM-TRANSPORTING ATPASE 36 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5405 Mal-Chr1 128324637 128324984 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5405 36 103 Primary Pumps ATPases AT3G42640 79.412 1.58e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5405 K01535 - pda:103721526 112.849