Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5390 ATGGCAGTGGAACTCATGGGGTTCCCAAAAATAGATGAACAAAAAGCTATACAAGAGGCTGCATCAGAAGGTCTCAAAGGGATGGAACACTTGATCCTTACCCTTTCTCATCAACCAACTCAATTAAACACTCAATTAACCGACCACACCGTTTCTAAGTTCAAAAAACTCATCTCTTTACTTAACCGAACCGGTCACGCCCGGTTCAGACGCGCCCCGGTTCATTCCTCCTCCTCATCATCATCACCGGTTCAACTTCAGCCTCCACCGGTTCAGATTCAATCCACACCAATATCATCCGTCTCTCCACCGAAGCAGTTTCCTTCTCCGGCACCAGCGCTGGCTCCGACGCCGATCTCCGTCCGTCACGCGCCGGCGAGCTTTGTTCAACCGCAATCACACAGTATGACACTGGATTTCACGAAGCCAAACGACGTTGTTTTGAGCTCAAACGGGAAAAACTCCATGGTTGAGCTTGAATTCTCGAAGGATACAACAACGTTTAGCGTTTCTTCGACTTCATCGTTTATGTCCTCTGCTATCACCGGCGACGGAAGTGTTAACGGCAAACAAGGATCCTCGATTTTTCTCACTCCGGCAGCGGCAGCACCAGCTCTCTCCGGCGGAAAACCGCCTCTCTCGTCGGCTCCGTCTAAGAAAAGGTGCCATGATCATGGTGAACACTCCGATGACGTTTCAGGCTCAAATAAGTGCCACTGCGTCAAGAGAAGGAAAAATAGGGTGAAGAGGACTGTGAGAGTACCGGCGATAAGTTCAAAGACCGCCGATATACCACCGGACGAGTACTCATGGCGGAAATATGGCCAAAAACCGATCAAGGGATCGCCGTATCCACGAGGCTATTACAAGTGTAGCACAGTGAGAGGATGCCCAGCAAGGAAACACGTGGAACGTGCAACAGATGATCCAACGATGCTGATTGTAACGTATGAAGGGGAGCACAGACACGCTATTCAAGCCGCGATGCAGGAGAACGCAGCCGGGATTGTGGGTTTGGTATTTGAGTCAACGTAA 1035 0.5014 MAVELMGFPKIDEQKAIQEAASEGLKGMEHLILTLSHQPTQLNTQLTDHTVSKFKKLISLLNRTGHARFRRAPVHSSSSSSSPVQLQPPPVQIQSTPISSVSPPKQFPSPAPALAPTPISVRHAPASFVQPQSHSMTLDFTKPNDVVLSSNGKNSMVELEFSKDTTTFSVSSTSSFMSSAITGDGSVNGKQGSSIFLTPAAAAPALSGGKPPLSSAPSKKRCHDHGEHSDDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLIVTYEGEHRHAIQAAMQENAAGIVGLVFEST* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5390 344 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 342 IPR044810 GO:0003700
Mal1g5390 344 MobiDBLite consensus disorder prediction 73 102 - -
Mal1g5390 344 Gene3D WRKY domain 248 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g5390 344 MobiDBLite consensus disorder prediction 70 113 - -
Mal1g5390 344 Pfam WRKY DNA -binding domain 267 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g5390 344 MobiDBLite consensus disorder prediction 206 237 - -
Mal1g5390 344 Pfam Plant zinc cluster domain 219 263 IPR018872 -
Mal1g5390 344 PANTHER WRKY PROTEIN 12 342 - -
Mal1g5390 344 MobiDBLite consensus disorder prediction 217 237 - -
Mal1g5390 344 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g5390 344 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g5390 344 SUPERFAMILY WRKY DNA-binding domain 261 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5390 Mal-Chr1 128009238 128011548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5390 1 343 WRKY Transcription Factor Family AT2G24570 59.375 5.71e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal1g5390 WRKY 7.4e-26 CL0274