Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5381 ATGATGGCTCATAAAAGAGCATACTATTGCATTTTCATACTCTTTATGTTGTCCATTAATTTTGAGCCAACTTTTGGTGACACAAATGGTCAAATTTTGATAAGGTTCAAAAACTTTTTGTCCAATAACAATGCTTTAAACAACTGGGTTGATGAGACTAATTTGTGCAATTGGGCTGGTTTGTTATGCACAAATAACAAATTTTATGGATTGAGATTAGAGAATATGGGACTAGGTGGGAAAATTGATGTAGACACATTGTTGGAATTGACTGATTTGGTTAGTTTTAGTGTCAACAATAACACATTTGAGGGTCCAATGCCTGAATTCAAGAAGCTTGTGAAATTAAGGGGATTGTTTTTGTCTAATAATAAATTCTCTGGTGAAATTTTAGATGATAGTTTTGAGGGTATGGGGAATCTTAAAAGGGTATTTTTGGCAGGAAATGAGTTCAATGGTCATATTCCTCTTTCACTTGCTCAATTGCCTAGACTTTTGGATTTGGACTTGCATGGGAATAGTTTTGGAGGTAACATACCAGAATTTCAACAAAGTGATTTTAGAGTATTTAACTTGTCTAATAACCAATTAGAGGGTCCAATACCAAACAGCTTAAGCAATGAGCCTTCAACCTCATTTTCTGCCAACAAAGGCCTATGTGGAAAACCTTTGAGCAATCCTTGCAACACACCCCCAACCAAATCTTTTGTGCAACCTAATTCAGGTCCTTCAACTCAAGGAAAGGGAAAGAAGAACAAAAACATCCTTATAGTTGTCATTGTAGTGGTAGCTATGGTTGTTTTAGCTTCAATAGTAGCACTTTTGTTTATCCAAAGCCGCCGGCGACGAAGATCAGAACAACTCCTGCCCATATTAGGCCTACAACTGAAATCTCAAAGCACTCCAAGTGTCAAGGAGACACAATCCATTGATTTAGTTGGTGATTTTAGTAAAGGTGAAATTGGAGAATTGAATTTTGTTAGGGAAGATAAAGGTGGTTTTGAGTTGCAAGATCTTCTTAGGGCTTCAGCTGAAGTGCTTGGAAGTGGAAGTTTTGGATCAACTTATAAGGCAATGGTTTTGAATGGACCAACTGTGGTTGTAAAGAGATTTAGGCACATGAATAATGTTGGGAAACAAGAGTTTTTTGAACACATGAAAAAGCTTGGAAGTTTGACACACCCTAATCTACTCCCTCTTATTGCATTCTACTACAAAAAAGAAGAGAAATTTTTGGTTTATGATTTTGGTGAAAATGGAAGCTTGGCTAGTCATCTACATGGTACAAATGGCATTGTGCTAAACTGGTCAACTCGTCTAAAAATCATAAAAGGAGTAGCAAGAGGTTTAGCACACCTCTACAAAGAATTTCCTAAACAAAACCTACCACATGGTCATCTAAAATCCTCGAATGTAATGCTAAACAATTCATTTGAGCCACTATTAACAGAGTATGGACTTGTACCTATGACAAACAAAAACCATGCACAACAATTCATGGCATCCTATAAATCACCAGAAGTTACACACTTTGATAGACCAAATGAAAAAACAGACATTTGGTGTCTTGGAATCCTTATACTAGAATTATTAACAGGAAAATTTCCAGCAAATTATTTAAGACACGGAAAAGGCGAAAATTCCGATTTAGCAACATGGGTGAATTCAGTTGTGAGAGAAGAGTGGACAGGTGAAGTGTTTGATAAGAATATAATGGAGACAAGAAATGGTGAAGGTGAGATGTTGAAGCTTTTGAGGATTGGAATGTATTGTTGTGAATGGAGTGTTGAGAGGAGATGGGATTGGAAAGAAGCTTTGGATAAGATTGAAGAGCTTAAGGAGAATGATGGTGAAGATGAATCTTTTTCTTATGTTAGTGAAGGTGATTTGTATTCAAGAGGTGTAACTGATGATGAATTCTCTTTTTCTGTTATTACTGATTCACATGTTGGTAAGTCTGGAAATGTGACAGTGTAG 1977 0.3632 MMAHKRAYYCIFILFMLSINFEPTFGDTNGQILIRFKNFLSNNNALNNWVDETNLCNWAGLLCTNNKFYGLRLENMGLGGKIDVDTLLELTDLVSFSVNNNTFEGPMPEFKKLVKLRGLFLSNNKFSGEILDDSFEGMGNLKRVFLAGNEFNGHIPLSLAQLPRLLDLDLHGNSFGGNIPEFQQSDFRVFNLSNNQLEGPIPNSLSNEPSTSFSANKGLCGKPLSNPCNTPPTKSFVQPNSGPSTQGKGKKNKNILIVVIVVVAMVVLASIVALLFIQSRRRRRSEQLLPILGLQLKSQSTPSVKETQSIDLVGDFSKGEIGELNFVREDKGGFELQDLLRASAEVLGSGSFGSTYKAMVLNGPTVVVKRFRHMNNVGKQEFFEHMKKLGSLTHPNLLPLIAFYYKKEEKFLVYDFGENGSLASHLHGTNGIVLNWSTRLKIIKGVARGLAHLYKEFPKQNLPHGHLKSSNVMLNNSFEPLLTEYGLVPMTNKNHAQQFMASYKSPEVTHFDRPNEKTDIWCLGILILELLTGKFPANYLRHGKGENSDLATWVNSVVREEWTGEVFDKNIMETRNGEGEMLKLLRIGMYCCEWSVERRWDWKEALDKIEELKENDGEDESFSYVSEGDLYSRGVTDDEFSFSVITDSHVGKSGNVTV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5381 658 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Mal1g5381 658 ProSiteProfiles Protein kinase domain profile. 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5381 658 Pfam Protein kinase domain 344 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5381 658 SUPERFAMILY L domain-like 53 208 - -
Mal1g5381 658 Gene3D Ribonuclease Inhibitor 28 134 IPR032675 -
Mal1g5381 658 MobiDBLite consensus disorder prediction 230 249 - -
Mal1g5381 658 Gene3D Ribonuclease Inhibitor 135 229 IPR032675 -
Mal1g5381 658 PANTHER LRR RECEPTOR-LIKE KINASE 9 621 - -
Mal1g5381 658 SUPERFAMILY Protein kinase-like (PK-like) 345 613 IPR011009 -
Mal1g5381 658 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 621 - -
Mal1g5381 658 Gene3D Phosphorylase Kinase; domain 1 312 416 - -
Mal1g5381 658 Pfam Leucine rich repeat N-terminal domain 30 63 IPR013210 -
Mal1g5381 658 Gene3D Transferase(Phosphotransferase) domain 1 418 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5381 Mal-Chr1 127783473 127786421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5381 1 643 Receptor kinase-like Gene Family AT5G35390 44.843 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal1g5381 Pkinase 6.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5381 - - gmx:100781593 895.19