Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5362 ATGGATAGTAGTAATGCTATAGACAGCAGCAACAATGTAAGAAATTTTGATTTGAATGAATGTCCGATGGAAGATATTTCTCCGGTAAATGATTATTCAGAGAGAAATGAGTTTTTAGAAGGTGATATAATTGAAAGTGCAGAGAAAGAAAATATTGTATCCTCTAATCAAAATATTGAGATAAATGAGTTTTTAGAAGAAGTTGATAATGATGGAACTTGTAATGAGACAAATACTCTTCCTTTTGTTGGTCAAATTTTTCTTAGTGAAGAAGAAGCATTTGTCTTTTATAAGAGATATGCATATCAACATGGGTTCTCGATTAAAAAAGGTAGATTCATCACACAAAATGGAATTATTACCAGACGTGATTTTTTTTGCCATCGTGAAGGTAAAGTCTCCTTGAAAATCATAGATCCATCAAAAGAACAGAGAAAAAGAGAAACATCAAAGTGTGAATGTAAAGCTCATTTACGAATTTTGTTACAAAAGTCTCATGATATATTTTCAAGTGAGTGGCGAGTTACAAAGTTTGTTGCTGAACATAACCATGATTTGCTAACCCAATCAGAGGTGCGCTTTTTACCGGCTTATCGGACTATCTTACAAGATGATTATGAACGCATTTTCTTATTAAAAGAAGGAGGGCTTTCAGTTAGACAAATAATGCGTGTCATAGAACTAGAGAAAAATGTGAAGCATGGTTATCTTCCATTTATTGAGAAGGACATTCGCAATCTTTTTTTGAAAGCTAATAAAAAAGTTGAAAGAAGTGATGTTATGGATTTTCTGAAGTATTGTGAGGATACAAAAAAGAATTGTCCCAAATTTCAGTATGCTTATACTCTTGATGAAGAAAGAAGGTTAGAGAATATTTTTTGGTCTCCTGCTTCTTGTTTTGATTGGTACCAAAAATATGGTGATGTTGTTGTGTTTGATACTACATACAAGGTCAATTCTTATGAAATGCCGTTTGGGATTTTTGTGGGTATGAATGGTCATGGAAAGACTATACTTTTTGGATGTGCACTCTTACGGAATGAAACGGTATCTACATTTCGTTGGTTAATGAAGACATTTGTATCTTTGATGAAGAAGCCGCCGAAGACTATATTAACTGATCAAGATCCATGGATGAAAGAAGCAATATCAAAAGACTTGCCATCAACAAAACATAGTTTTTGCATATGGCACATCACTTATAAGTTTAGTTCTTGGTTTAATGCTATACTTCGAGACAAATATGCAAAATGGTGTTTTGATTTTTATGAGTTGTATAAGTTGGAGACACATGAAGAATTTGAGCATCAATGGCCGGAAGTTGTTGCTAAGTATAACTTGCAGTCAAATAAACATGTGAAAGGGTTGTATGAAATCAGAAATTATTGGGCACTAGCTTATCTTCGTGACCATTTCTTTGGTGGGATGACAACCACCGGAAGATCAGAGAGTATTAATGCATTTATCAAAAGATTCATTGATTCTCACACAAGTTTAAGTGACTTTGCAAAACAGGTTGATATTGCAATTGAGGATATTAAGCAAAAAGAAGAGCATGATATAATGTTAGAAAAGTGCAAGGGATCAAATATGAAGTTGATGTCACCCTTACAAGAGCAAGCTCATAGTGTTCTCACACGTATTGCTTTTAAGAAATTTCAAGAGGAGTTTGAAAGGTCCATTCAATATTCAATTCATAGTGAAAATGATAATATGTTTGTGTTGCAGTATTATAAAGATGGTAATAGCAAAAAACATGTAGTCTTTTGGGATGGTAAAATAGCTACATGTAGCTGCAAGAATTTTGAATTTTGGGGGATATTATGTCGTCATATTCTCAGTATTTTTCTTCATAAAGATTGCCATGAAATTCCTTCTAACTACTTGCCATCACGGTGGCGGCTTCAAGCACCACACAACGATGATGAAATTGAGCCCCAAGGTAATGTTGTCATTGAGGAAGAAGTAATTGATTGCAACAATGAAGTTCATTGTCCTCCAAAGTCTAAACCAAAAGGTCGTCCTAAACGAAGACGTCTTAAAGGTGGAAAAGAGTTACCACATAGCACGAACACGTGTGGATTATGCAAAGGTGTAGGGCATAACATTGTTACATGTCCTCTAAATGAAAAGAAGAAGAATAACAAGAAGAAGAAGAAGAAAGCTTGTGAAGATGCAAATTTAAACCCAATTCTTCTTTCAAAAGTTTAG 2211 0.3401 MDSSNAIDSSNNVRNFDLNECPMEDISPVNDYSERNEFLEGDIIESAEKENIVSSNQNIEINEFLEEVDNDGTCNETNTLPFVGQIFLSEEEAFVFYKRYAYQHGFSIKKGRFITQNGIITRRDFFCHREGKVSLKIIDPSKEQRKRETSKCECKAHLRILLQKSHDIFSSEWRVTKFVAEHNHDLLTQSEVRFLPAYRTILQDDYERIFLLKEGGLSVRQIMRVIELEKNVKHGYLPFIEKDIRNLFLKANKKVERSDVMDFLKYCEDTKKNCPKFQYAYTLDEERRLENIFWSPASCFDWYQKYGDVVVFDTTYKVNSYEMPFGIFVGMNGHGKTILFGCALLRNETVSTFRWLMKTFVSLMKKPPKTILTDQDPWMKEAISKDLPSTKHSFCIWHITYKFSSWFNAILRDKYAKWCFDFYELYKLETHEEFEHQWPEVVAKYNLQSNKHVKGLYEIRNYWALAYLRDHFFGGMTTTGRSESINAFIKRFIDSHTSLSDFAKQVDIAIEDIKQKEEHDIMLEKCKGSNMKLMSPLQEQAHSVLTRIAFKKFQEEFERSIQYSIHSENDNMFVLQYYKDGNSKKHVVFWDGKIATCSCKNFEFWGILCRHILSIFLHKDCHEIPSNYLPSRWRLQAPHNDDEIEPQGNVVIEEEVIDCNNEVHCPPKSKPKGRPKRRRLKGGKELPHSTNTCGLCKGVGHNIVTCPLNEKKKNNKKKKKKACEDANLNPILLSKV* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5362 736 Coils Coil 709 729 - -
Mal1g5362 736 SMART 26again6 595 622 IPR006564 GO:0008270
Mal1g5362 736 ProSiteProfiles Zinc finger SWIM-type profile. 573 620 IPR007527 GO:0008270
Mal1g5362 736 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 634 IPR031052 GO:0006355
Mal1g5362 736 Pfam MULE transposase domain 309 400 IPR018289 -
Mal1g5362 736 Pfam SWIM zinc finger 587 619 IPR007527 GO:0008270
Mal1g5362 736 Pfam FAR1 DNA-binding domain 96 187 IPR004330 -
Mal1g5362 736 MobiDBLite consensus disorder prediction 667 686 - -
Mal1g5362 736 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 74 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5362 Mal-Chr1 127414269 127416662 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g5362 MULE 1.4e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5362 - - gsj:114409893 1219.53