Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5358 ATGGAACCAAAATGGAGCACCATTCTACCAGCATCCTCCATTTTCTCCGGCTTCGATGACCTCAAATGGATCACAGCAGAATTCGGCCATGAACTTTTCACAAAGCGGCCTACTACAGTCGAAACAGCCAACGATTCGGGGAACGACGTCGACGTGAAACCGTGTAAGGTGGATCCATTCATCAGTGTCGGCGATGTTCGCTCTGGGAACATCGCCGACACCGCCGTTTTTCATAATCTGGATGCAGTAACTTCATTTTCAACTTGTGGTGAACCGACAAATAATACTATTGCATGCTCCCAAAACCTCACTACAAAGCATTCCACCATCACTGCAACTATTGAATCTCAATCATCCATTTCTGCTACCGTTACGAGTCCAGTATCAGCTAATAAACCAAGCAGTAGAGAAAATCAAGTGAAAGGAGGAGTTACTACTACAAGTGGTTCCTCACGTGATCCATCTGATGAAGATGATGAAGCAGGACCTTGTGAACAAAGCACAAACCCTGTTGATATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCCAGAAGGTCTAGAAGAAGAAAGCAAGCACATTTGGCAGACTTAGAGGTTCAGGTTGAACAGCTGAGGCTTGAAAATGCAAGCTTATTTAAGCAGCTTACAGATGCCAGCCAACAATTTCGTGATGCTAATACTAATAACCGAGTGCTAAAATCAGATGTTGAAGCTTTGAGAGCTAAGGTAAAATTAGCAGAGGATATGGTTTCTAGGGGCCCTTTACCTACTTTCAACAACCAGCTTCTCCAAAACCAGAGTCAATTGAACACCACTCCACCACAAATCAACACCAGTAGTCTCCGGTGCATGGCGCATGTTTCGCCCACCATCACCGTCCATGGAAACGATGCTTCATATGGTGTTAGTGGACAGAATTCAGCAATTGGACTTGGAGATTTTGATATATCTTGCAGTCATGATTTCAACAATGGAGTCAATAGTGATGCTGTGAGCTCTTTGACTAGCATATGGCCATAA 1029 0.4431 MEPKWSTILPASSIFSGFDDLKWITAEFGHELFTKRPTTVETANDSGNDVDVKPCKVDPFISVGDVRSGNIADTAVFHNLDAVTSFSTCGEPTNNTIACSQNLTTKHSTITATIESQSSISATVTSPVSANKPSSRENQVKGGVTTTSGSSRDPSDEDDEAGPCEQSTNPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGPLPTFNNQLLQNQSQLNTTPPQINTSSLRCMAHVSPTITVHGNDASYGVSGQNSAIGLGDFDISCSHDFNNGVNSDAVSSLTSIWP* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5358 342 MobiDBLite consensus disorder prediction 117 195 - -
Mal1g5358 342 Coils Coil 183 252 - -
Mal1g5358 342 PANTHER BASIC LEUCINE ZIPPER 63 56 342 - -
Mal1g5358 342 MobiDBLite consensus disorder prediction 117 151 - -
Mal1g5358 342 Gene3D - 173 230 - -
Mal1g5358 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 177 192 IPR004827 GO:0003700|GO:0006355
Mal1g5358 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 235 IPR004827 GO:0003700|GO:0006355
Mal1g5358 342 Pfam bZIP transcription factor 173 224 IPR004827 GO:0003700|GO:0006355
Mal1g5358 342 CDD bZIP_plant_GBF1 175 226 IPR045314 GO:0003700|GO:0006355
Mal1g5358 342 SUPERFAMILY Leucine zipper domain 174 224 IPR046347 GO:0003700|GO:0006355
Mal1g5358 342 SMART brlzneu 170 234 IPR004827 GO:0003700|GO:0006355
Mal1g5358 342 PANTHER BASIC LEUCINE ZIPPER 9 56 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5358 Mal-Chr1 127322389 127327340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5358 115 342 bZIP Transcription Factor Family AT5G24800 51.899 6.15e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal1g5358 bZIP_1 5.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5358 K25784 - gmx:778193 370.548