Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5355 ATGCAAAAGGACAAAGAAATTGTTAGCAAAGAAGGGAAGGATATGGAAATGGAAGGAACTCGTGAGAAAGAGGAAACCCTACCTCCCGGATTTCGATTTCATCCTACCGATGAAGAACTAATCACTTACTATCTTGTAAACAAGATTTCAGATTCTGATAATTTTACATGCAAAGCAATAGGTGATGTAGATCTCAACAAATGCGAGCCATGGGAGCTTCCAGGGAAGGCAAAGATGGGCACAAAAGAATGGTACTTCTTCAGTCTAAGAGATCGTAAATATCCAACAGGTGTGAGAACCAATAGAGCAACAAACACTGGATATTGGAAAACCACAGGGAAAGACAAGGAGATTTTCAACAGTGTTACATCTGAGTTGGTTGGTATGAAGAAGACTTTGGTTTTTTACAAAGGTAGGGCTCCTAGAGGAGAGAAAACCAATTGGGTCATGCATGAATACCGTATTCATTCAAAATCCAGCTTCAGAACCAACAAGGATGAATGGGTAGTTAGCAGGGTATTCCGGAAGAATGCTGGTGCAAAGAAGTACCCTTCCAATTCAAACCCTACAAGAGCAATACTAAATCCTTACAATATTAATCTAGAAGTTGGTCCTAATAGCTTTAATAATCATATGCCACCACAACCAATGATGCAGCTAGGGCTAGATTCTCATTTCCAGCTCTATGGAAGAAACTACATCAACACTGGTGGTATACCAATGCATCAATATTCCCAGTTACCATCATCAACCTTAGGAGGAGAAGGATTCACCATTTCAGGGCTTAATTTGAATCTTGGAGGATCCACATCATCACAAACTATTTTGAGGCCAATGCCATCAACTACTCATACTATGGCTGCTGATTTCACCTCCAACATGATGATGGCAGGTGCAAATAGTAATACCCTAGTTGCTGCAGAGAATAATAATAATGTAGGGTTTGGTGGTGGAGATCAAGTGAATAATGCAAATCATCCTCATGGAAATAGGTATAATATGCAGGGAAATATGGACCATTGTGTGGATCTTGATCATTATTGGCCACCATCTTATTGA 1059 0.3985 MQKDKEIVSKEGKDMEMEGTREKEETLPPGFRFHPTDEELITYYLVNKISDSDNFTCKAIGDVDLNKCEPWELPGKAKMGTKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSFRTNKDEWVVSRVFRKNAGAKKYPSNSNPTRAILNPYNINLEVGPNSFNNHMPPQPMMQLGLDSHFQLYGRNYINTGGIPMHQYSQLPSSTLGGEGFTISGLNLNLGGSTSSQTILRPMPSTTHTMAADFTSNMMMAGANSNTLVAAENNNNVGFGGGDQVNNANHPHGNRYNMQGNMDHCVDLDHYWPPSY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5355 352 MobiDBLite consensus disorder prediction 1 31 - -
Mal1g5355 352 ProSiteProfiles NAC domain profile. 27 176 IPR003441 GO:0003677|GO:0006355
Mal1g5355 352 Pfam No apical meristem (NAM) protein 28 155 IPR003441 GO:0003677|GO:0006355
Mal1g5355 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 348 - -
Mal1g5355 352 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 12 348 - -
Mal1g5355 352 Gene3D NAC domain 36 181 IPR036093 GO:0003677|GO:0006355
Mal1g5355 352 SUPERFAMILY NAC domain 23 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5355 Mal-Chr1 127248254 127251283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5355 21 349 NAC Transcription Factor Family AT2G24430 49.861 1.09e-102 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal1g5355 NAM 2.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5355 - - gmx:100811175 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5355 1 127248254 127251283 Mal2g0734 2 8590652 8594041 PCT