Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5327 ATGATAATTAAGAAGAATCTCAAATCCGAAATGCCGAATCGGAAACGGAGAAGAGTAACGGAAAACGACGAGTTGACTCACAAAAAGAAGAAAATTAACGGAAAAAATAATTTTCCGTTAAATCTTCTTGCTGGTGCAATTCCCGTTAGTTTTACTGGTTTACTTGGTGCCACCGTTGTGGCACCTGATAACAGTAGTAACTGCTTTTCCGTTGTTTCTGACGGAAAAGCAGATACCGTTAAAACCGCGGCGGCTAGTGGTACACGGCCGCCGTTGGTTAGAACCTCACGCGGCCGTCTTCAGGTTATGCCGTCGCGGTTTAATGATTCAGTTATTGTGAATTGGAGGAAAGATGGTAAAAACAATGCGGCCGCAGCAAATTCTACGGCCGCGGCCACGAGCTTTCGTGAATTTGAATTTGAAAAATATGAAGATTTTAGTGCCAGGAAATGCAATGGTAAGGGGAAGAATGGAACTGGAACCGGAACCGGTGGTGGTCGGGGGTATTCGGTTTTGTGTGAGGAGGTGTTGCATAAGAATTTTGGTGTTGCTGCTGCTAGTAAGGAAATGAGTTTGCGTGAGATTTTTGAGGAAACAAAGGTGAACAATGGAGTTTTGAAGAAGAAAGAAGGGTTTTTTGGGACAGAAGATTTTGATGCAGGTGATATAGTTTGGGCTAAGACTAGGAAAAAGGAACCATTTTGGCCTGCAATTGTTATTGATGCTATGACTCAAGCACCTGAGCTGGTTTTGAGATCATGTATAGCTGATGCTACTTGTGTCATGTTTCTTGGCTACTCTAGGAATGAAGATCATAGGGATTTTGCATGGGTGAAGTATGGAATGATTTTTCCATTTGTGGAAAATGTAGAAAGGTTTCAAGAACAGTCTGAGTTGAGTTACTGTGATCCGTCTCAATTTCAAGCGGCAATTGAGGAGGCGTTTTTGGCGGATCAGGGGTTTGTAGAGAAGTTGTTAGAAGATATAAATGCGGTGGCCGGTAATAATGGTTGCAGTAATAGTTCTATTATTACAGGCTTTCAGAAGCTCTCTGCTTCAAACCGGAATGCGGGTGGTTCTGTTCAGAAGAAGGATTTATTTGACAGAAAGAAAAATGTGGGACTTTGTGACGAATGTGGATTGAACCTTCCTTTCAATATGTCAAAGAAAACAAAGGATTTGACTCCTGGTGGTCAACTCCTATGTAAAACATGTGCTAGGTTGACAAAATCAAAACATTATTGCGGCATATGTAAGAAAGTTTGGAATCAATCGGATAGCGGAAGCTGGGTCCGTTGTGATGGATGTAAAGTGTGGGTGCATGCCGAATGCGACAAAATCTCCAGCATCCTTTTTAAGAATCTTGGAAGCACTGAATATTTCTGCCCTGCTTGCAAAGTGAAGTTTAATTTTGAATTATCTGATTCAGAAAAACCACATCCAAAAGTCAAATGGAGCAAATACAATGGGAAGGTAGTACTTCCAAAGAAGGTCACTGTTCTCTGCAATGGTGTGGAAGGCATATATTTTCCAAGCCTTCACTTAGTTATGTGCAAGTGTGGTTTTTGTGGGACTGAAAAGCAAGCACTTAGTGAATGGGAACGCCACACAGGTTCCAAATATAGAAACTGGAAAACAAGTATACAGATTAAAGGATCCATGATATCGCTGGAACAATGGATGCTGCAGTTGGCTGAGTTTCATGCTAAAGCTGTAGTTGCTTCTGTCAAACCTAAAAGACCATCCTCAAAAGAAAGAAAACATAAATTGCTTACCTTTCTGCAAGACAAGTATGAACCTGTTTGTGCTAAGTGGACTACAGAACGATGTGCTGTATGTAGATGGGTTGAAGATTGGGACTACAACAAAATTATCATCTGCGTCAGATGTCAAATAGCTGTTCATCAAGAATGCTATGGAGCAAGAAATGTTCGAGACTTTACATCATGGGTTTGTAAAGCTTGTGAAACACCGGATATCACACGGGAATGTTGTCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCTACTGATATTCATCCATTATGGGTTCATGTCACTTGTGCCTGGTTTCGACCTGAAGTATCTTTTGCTAGTGATGAGAAAATGGAGCCTGCTTTGGGTATCTTAAGTATTCCATCAAATTCTTTTGTGAAGATTTGTGTTATTTGTAAGCAAATCCATGGTTCGTGCACACAATGTGTCAAGTGTTCCACTTATTTCCATGTCATGTGTGCATCAAGGGCCGGTTATCGCATGGAGTTGCATTGTTTGGAAAAAAATGGTAAACAGACAACAAGAATGGTTTGTTACTGTGCTTATCACAGGGCTCCCAATCCAGACACTGTTTTGATTATACAAACCCCTCATGGGGTCATTTCAACTAAAATCCTTATCCAAAATAAGAGAAAAGTTGGGTCGAGATTAATTTCGTCGAACAGAATAAAGATAGAAGACACTCCTCCAGGAGATAACACCGAACATGACCCATTTTCTGCTGCTAGGTGCCGAATATTTATAAGAACGAACCACACAAAAAAGAGAGCAGCTGATGAAGCCATTCCTCAAAAAGTGAGGGGTCACTACCATCATCCTTTAGATGCAATACAGAGATTAAATTCATCCAAAGTGGTAGATGATGAGTCTCAGACATTTTCATCTTTTCGGGAACGCCTTCATCACTTACAGAGAACCGAAAACGAACGAGTGTGCTTCGGTAGATCAGGCATACATGGATGGGGCCTATTTGCACGAAGAACTATTCAAGAAGGAGAAATGGTCCTTGAATATCGTGGTGAACAAGTAAGGCGCAGCGTTGCAGATCTAAGGGAGGCACGTTATAAATTAGAAAGGAAAGACTGCTATCTGTTCAAAATAAGTGAAGAGGTGGTAGTTGATGCAACGGATAAAGGAAATATAGCGCGGCTAATCAACCATTCTTGTATGCCAAATTGCTATGCAAGGATCATGAGTGTGGGTCATGACGAGAGCCGGATCGCACTCATTGCCAAGACTAACGTATCTGCTGGTGATGAGCTAACGTATGACTACTTGTTTGATCCTGATGAGCCTGATGAATTTAAAGTTCCTTGTTTATGTAAAGCTCCAAACTGCAGAAAATTCATGAATTAA 3132 0.4116 MIIKKNLKSEMPNRKRRRVTENDELTHKKKKINGKNNFPLNLLAGAIPVSFTGLLGATVVAPDNSSNCFSVVSDGKADTVKTAAASGTRPPLVRTSRGRLQVMPSRFNDSVIVNWRKDGKNNAAAANSTAAATSFREFEFEKYEDFSARKCNGKGKNGTGTGTGGGRGYSVLCEEVLHKNFGVAAASKEMSLREIFEETKVNNGVLKKKEGFFGTEDFDAGDIVWAKTRKKEPFWPAIVIDAMTQAPELVLRSCIADATCVMFLGYSRNEDHRDFAWVKYGMIFPFVENVERFQEQSELSYCDPSQFQAAIEEAFLADQGFVEKLLEDINAVAGNNGCSNSSIITGFQKLSASNRNAGGSVQKKDLFDRKKNVGLCDECGLNLPFNMSKKTKDLTPGGQLLCKTCARLTKSKHYCGICKKVWNQSDSGSWVRCDGCKVWVHAECDKISSILFKNLGSTEYFCPACKVKFNFELSDSEKPHPKVKWSKYNGKVVLPKKVTVLCNGVEGIYFPSLHLVMCKCGFCGTEKQALSEWERHTGSKYRNWKTSIQIKGSMISLEQWMLQLAEFHAKAVVASVKPKRPSSKERKHKLLTFLQDKYEPVCAKWTTERCAVCRWVEDWDYNKIIICVRCQIAVHQECYGARNVRDFTSWVCKACETPDITRECCLCPVKGGALKPTDIHPLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCVKCSTYFHVMCASRAGYRMELHCLEKNGKQTTRMVCYCAYHRAPNPDTVLIIQTPHGVISTKILIQNKRKVGSRLISSNRIKIEDTPPGDNTEHDPFSAARCRIFIRTNHTKKRAADEAIPQKVRGHYHHPLDAIQRLNSSKVVDDESQTFSSFRERLHHLQRTENERVCFGRSGIHGWGLFARRTIQEGEMVLEYRGEQVRRSVADLREARYKLERKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGHDESRIALIAKTNVSAGDELTYDYLFDPDEPDEFKVPCLCKAPNCRKFMN* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5327 1043 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 1043 IPR025780 -
Mal1g5327 1043 Pfam PHD-zinc-finger like domain 663 775 - -
Mal1g5327 1043 Gene3D SET domain 839 1043 IPR046341 -
Mal1g5327 1043 SUPERFAMILY Tudor/PWWP/MBT 213 319 - -
Mal1g5327 1043 ProSiteProfiles PWWP domain profile. 220 289 IPR000313 -
Mal1g5327 1043 ProSiteProfiles Extended PHD (ePHD) domain profile. 661 776 IPR034732 -
Mal1g5327 1043 Gene3D - 214 319 - -
Mal1g5327 1043 CDD SET_SETD1-like 888 1039 - -
Mal1g5327 1043 SUPERFAMILY FYVE/PHD zinc finger 608 672 IPR011011 -
Mal1g5327 1043 PANTHER PHD FINGER PROTEINS 1 1043 - -
Mal1g5327 1043 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 409 469 IPR013083 -
Mal1g5327 1043 SMART PostSET_3 1027 1043 IPR003616 -
Mal1g5327 1043 Pfam SET domain 912 1017 IPR001214 GO:0005515
Mal1g5327 1043 CDD PHD_ATX3_4_5_like 609 655 IPR042011 -
Mal1g5327 1043 ProSitePatterns Zinc finger PHD-type signature. 610 655 IPR019786 -
Mal1g5327 1043 CDD PHD_TCF19_like 415 465 - -
Mal1g5327 1043 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 602 658 IPR013083 -
Mal1g5327 1043 Pfam PHD-finger 414 467 IPR019787 -
Mal1g5327 1043 SUPERFAMILY SET domain 895 1040 IPR046341 -
Mal1g5327 1043 Pfam PHD-finger 622 656 - -
Mal1g5327 1043 MobiDBLite consensus disorder prediction 1 24 - -
Mal1g5327 1043 ProSiteProfiles Post-SET domain profile. 1027 1043 IPR003616 -
Mal1g5327 1043 ProSiteProfiles SET domain profile. 901 1018 IPR001214 GO:0005515
Mal1g5327 1043 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 659 777 IPR013083 -
Mal1g5327 1043 SUPERFAMILY FYVE/PHD zinc finger 411 470 IPR011011 -
Mal1g5327 1043 SMART set_7 901 1024 IPR001214 GO:0005515
Mal1g5327 1043 ProSiteProfiles Zinc finger PHD-type profile. 412 468 IPR019787 -
Mal1g5327 1043 Pfam PWWP domain 221 314 IPR000313 -
Mal1g5327 1043 ProSiteProfiles Zinc finger PHD-type profile. 607 658 IPR019787 -
Mal1g5327 1043 SMART PHD_3 609 656 IPR001965 -
Mal1g5327 1043 SMART PHD_3 720 776 IPR001965 -
Mal1g5327 1043 SMART PHD_3 414 466 IPR001965 -
Mal1g5327 1043 CDD ePHD_ATX3_4_5_like 664 775 IPR041955 -
Mal1g5327 1043 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX4 1 1043 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5327 Mal-Chr1 126821894 126831254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5327 610 775 C2H2 Transcription Factor Family AT3G14740 35.227 1.51e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal1g5327 zf-HC5HC2H_2 7.2e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5327 - - gmx:100811337 1536.16