Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5326 ATGGAGAACAGAAAGCGTGAGCCAAGGAATGAAACAAGATGTGGCTGCAATGCAAAATTTAGAGTACATGTAGATATTGTTTCAAAGCATTGGTATGTTACCGTTTTTGAAATTGAGCACAACCATGAGTTGTATGGTACCATGGCCAATGCAGATGGTGGGTTTCACAAGGTTGGATTTGTTAAAAAGGATTTGTATAACCAAGTTAGCAAGCAACGTAAACAGGTTTCTTCGGATGCAAGTGGTGCGGTTAAGTATCTTCGGGGACTGAAGACTAAAGATCCACTTATGTTTGTGACACACACCCTTGACAAGGATAAAAGGCTTGAGCGGTTGTTCTGGTGCGATGGGGAAAGTAGAATGAACTATGAGATATTTGGGGATGTCCTGGCATTTGATGCTACTTATCGGAAAAACAAGTACAATTGCCCTTTTGTTGTATTTTCTGGGGTTAACCACCATAATCAGACGATAGTCTTTGGGACCGGGAAGCAGCCGTTGTCTGTAATTACTGATGGGAATCTTGCAATGAAAAATGCTATTAAGAGAGTATTTCCCAACAGTCATCACCGATTATGTGCTTGGCATCTACTACGGAATGCACATGCCAATATTGGAATTCCGGAGGTTATGTCTTATCTTAAAAAGTGCATGTTAATTTTGAAAAATTGTGAGGACAATAGCTGGATCAACGAAATGTATGCTAAAAAAAAGATGTGGGCAACTGCACACATAAGGGGTTCTTTCTTTGCTGGGATTCGAACCACATCTCGATGCGAGGCACTCCATAGCCATATTGGACAGTTTTTTTTACGGTCACTAGAGAGATCAGCAGCAAAAATGTTCACAAAGGAGATATTTTTCATAGTAACTGAATCTCAAAAAATGGCTATGGGGTGCATCTTCAAAGTTTCAAAATACTGTGTTGGTGGGAGTGAATGGCATGTAAGTTTTTGCGAAGAACCTATTAACCTGAAATGCAGTTGTTTGAGAATGGAGTCACTAGGATTGCCATGTGATCATATCATTGTCGTGTTGCTGTATATGGATTTTGATGATCTTCCTAGTTGTTTGGTTTTGCCTAGATATTCTAGGATAGTCCAGTTGTGTAAAGTTGTTGCCGGGTTGGTGTATGAAGATGTTGAGGAGTACAATAAGTTTGTTGATAGTCTGAGTGTTGAAATACGGAGATTAAAAATAAAAAATAATATTGATTGTTCTGAGTTATCTCCCGTTTTAGAAACTGGTAATGACGATGATGAACCTTTAGATCCTGATATTGTCAGAACAAAAGGTTGCGGTTCAATCCCTACGGGTACCCCGGGCAGGAGGAAACGTTTGCAAACTTGCAGCATATGTGGCGTAATAGGTCATAATAAACGATGTTGCCCACAACGGAGCTGCAATGTTGTTGATGGGCAGGGAGTATCCCCCGTGAATGGTGAAGAAGAAAGCAAAAAAGAGGTCAGCTACAACCTTAACAGTCGGACGGTAAGCGGAACTTTTGAAACAATTTTGTTAATATTTTGA 1530 0.4007 MENRKREPRNETRCGCNAKFRVHVDIVSKHWYVTVFEIEHNHELYGTMANADGGFHKVGFVKKDLYNQVSKQRKQVSSDASGAVKYLRGLKTKDPLMFVTHTLDKDKRLERLFWCDGESRMNYEIFGDVLAFDATYRKNKYNCPFVVFSGVNHHNQTIVFGTGKQPLSVITDGNLAMKNAIKRVFPNSHHRLCAWHLLRNAHANIGIPEVMSYLKKCMLILKNCEDNSWINEMYAKKKMWATAHIRGSFFAGIRTTSRCEALHSHIGQFFLRSLERSAAKMFTKEIFFIVTESQKMAMGCIFKVSKYCVGGSEWHVSFCEEPINLKCSCLRMESLGLPCDHIIVVLLYMDFDDLPSCLVLPRYSRIVQLCKVVAGLVYEDVEEYNKFVDSLSVEIRRLKIKNNIDCSELSPVLETGNDDDEPLDPDIVRTKGCGSIPTGTPGRRKRLQTCSICGVIGHNKRCCPQRSCNVVDGQGVSPVNGEEESKKEVSYNLNSRTVSGTFETILLIF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5326 509 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 163 IPR031052 GO:0006355
Mal1g5326 509 ProSiteProfiles Zinc finger SWIM-type profile. 312 350 IPR007527 GO:0008270
Mal1g5326 509 PANTHER OS02G0262500 PROTEIN 65 163 - -
Mal1g5326 509 PANTHER OS02G0262500 PROTEIN 4 44 - -
Mal1g5326 509 PANTHER OS02G0262500 PROTEIN 164 271 - -
Mal1g5326 509 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 44 IPR031052 GO:0006355
Mal1g5326 509 Pfam FAR1 DNA-binding domain 3 44 IPR004330 -
Mal1g5326 509 Pfam MULE transposase domain 164 200 IPR018289 -
Mal1g5326 509 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 164 271 IPR031052 GO:0006355
Mal1g5326 509 SMART 26again6 325 352 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5326 Mal-Chr1 126815825 126817692 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g5326 FAR1 5.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5326 - - gmx:102669007 412.535