Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5321 ATGGCAAAACCATCTTTTCGTGTACATGGAGGATCAATTTCATCTAAAAGCAACAGGACTTTTGAAACCATCATTTTTCCTCAGGAGGGCAAAGTCCAAGTCTGTCCAATTTTCTTCAAGGAATACTTCCATAAAATTAAACGCCAGGATTATGGCTATGTTATTGATAATTCCGGAAGAAATGTTAGGATAACTTTTGGAAGGACGGAAAATGATAATTACATTCTATCTGGGAGGTCAATTGCTAATAACTTCGCTTTGTACAAGCCAACAGCTATTACTTTAACTTATCTTGGAAAATCGAATAGGTTCCGGATGAAAATTTTACCTAAACGGGTGCGTGGCAGATGGGAGGAGGATGTGAAGGAGGAAGTCATCTCCATAGATTATGATGTGAAGGAGGATATCAACCGATATGGAGCCCTGAACAAATTGAAAGTTGATTTGGAAGAATGTTTGCATTGGGAAATGGTTGTTACTAAGGCCATTGCTAGGAAAAAGAAGCCGCAGGTGATGCATTTTCCGAATAGGGTGTCGTACCATATTATTTCTGATCAACAAAAAACAATGCTGTTAATGGATGTTCAGAAACAAAACCAATACAAGTGTCGTGTAATAACATCCAACAGAGAAAATAATGAAAAATATTTGGGAATGAAATGGTATCAATTTGTGAAGGATCGAAAGCTTAGGGAGGGTGATTTGCTCGTCTTTGAATTTGAGGAGGCTCCAAAGAAGCTAACTGTTGAGGTTGTCCGTCGTAATGAACGAGGTTGA 777 0.3835 MAKPSFRVHGGSISSKSNRTFETIIFPQEGKVQVCPIFFKEYFHKIKRQDYGYVIDNSGRNVRITFGRTENDNYILSGRSIANNFALYKPTAITLTYLGKSNRFRMKILPKRVRGRWEEDVKEEVISIDYDVKEDINRYGALNKLKVDLEECLHWEMVVTKAIARKKKPQVMHFPNRVSYHIISDQQKTMLLMDVQKQNQYKCRVITSNRENNEKYLGMKWYQFVKDRKLREGDLLVFEFEEAPKKLTVEVVRRNERG* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5321 258 Pfam B3 DNA binding domain 173 255 IPR003340 GO:0003677
Mal1g5321 258 CDD B3_DNA 172 253 IPR003340 GO:0003677
Mal1g5321 258 SUPERFAMILY DNA-binding pseudobarrel domain 154 255 IPR015300 -
Mal1g5321 258 Gene3D - 142 257 IPR015300 -
Mal1g5321 258 ProSiteProfiles B3 DNA-binding domain profile. 157 255 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5321 Mal-Chr1 126750759 126752414 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g5321 B3 1.7e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5321 - K01148 mtr:MTR_5g071410 122.864