Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5318 ATGTCGGAATTTGATTTATTTGTAGAGGGAGATCTGTTCAAAGCACCCGAGACGATTATTGAAGAACCGGAGATGGACCTTGATCCAATGCAAGCAGCCATGTCAATGATATCTGGTGGGGAAGACGTGTCTTCGCAGGGTATAAAATCTTCGGATATTGATGATGTACTTCAAAATGAACAGCTTTTGAGTGAGGTATACTATGAGTGCAAAAAAGATCTCTTAGAAAAGGCGGCTATAGAGTCACCTCTGTCTGAAATTCTTGAAATCAAGATTCCTGCTCTGAACATAGATGAGTATTCGATTCAAGAAAACAAACCAATTCCTGATGTACTATTATCGAAGAGTGTCAGTTCAGGAAATTTAAGTTCAATGGATTGGATGCATGGTGCTGCAATGAAGCCTACTTTCCTTGATTTCCCTGGAATAGATTTTAACTCAGTTTATGGCATGCGGAGAGCATTTAGTGAAGGAGATATAAAGACTCTTGGAAATGGTAACATGAGTGTTGGCCAATCCACTCTAGAGAGGCCTTTTCTTCTCAGCAACTGCACGAGTGAGCAACGTCAAGAAAAACTCTCCAGATATAGGAATAAGAAGTCAAGGAGAAATTTTGGGAGGAAAATCAAGTATGCTTGTAGGAAGGCGCTCGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCGAAAACGGAGGAATTAGATGTCAAGAGGCAATGA 720 0.4083 MSEFDLFVEGDLFKAPETIIEEPEMDLDPMQAAMSMISGGEDVSSQGIKSSDIDDVLQNEQLLSEVYYECKKDLLEKAAIESPLSEILEIKIPALNIDEYSIQENKPIPDVLLSKSVSSGNLSSMDWMHGAAMKPTFLDFPGIDFNSVYGMRRAFSEGDIKTLGNGNMSVGQSTLERPFLLSNCTSEQRQEKLSRYRNKKSRRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKRQ* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5318 239 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 237 - -
Mal1g5318 239 Pfam CCT motif 189 231 IPR010402 GO:0005515
Mal1g5318 239 PANTHER CCT MOTIF FAMILY PROTEIN 1 237 - -
Mal1g5318 239 ProSiteProfiles CCT domain profile. 189 231 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5318 Mal-Chr1 126735892 126737711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5318 164 235 C2C2-CO-like Transcription Factor Family AT5G57660 43.243 4.88e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g5318 CCT 1.2e-17 CL0281