Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5310 ATGGACTTTGATAGACTTGGACCGTTGGATCCTGGTGGCTCCTCCCGTAGATCCACCGCACCTCTAACAAACTCCACCGTATCCAATTCTCAAAAAAGCAATAAGAAGCTTATGATGTTGTCGATTCTCGCCGCCGTGTTGATCATCGCCTCGGCTATCTCCGCCGCACTAATCACCGTAGTCCGCTCCCGTGCTTCATCTAACAATTCAAATCTCCTCCGTGCTAAACCAACTCAAGCAATCTCCCGAACTTGTAGTAAAACTAGATACCCTTCACTTTGCATCAATTCACTCCTAGATTTCCCTGGCTCAACTTCAGCTTCTGAGCAAGAACTTGTTCATATCTCATTCAACATGACACACCGTCACATCGGTAAAGCTCTCTTCGCATCCTCAGGCCTCTCGTATACACTCGCGAACCCACGGGTTCGCGCTGCATACGAGGATTGCCTGGAACTAATGGACGAATCCATGGACGCGATCAAACTGTCCATGAACTCTCTCACCATGTCCTCAACTTTATCCCGCGATGATGGAGAAACAGGACGATTCTCCAACGTCGCAGGATCAAATGAGGATGTGATGACGTGGCTCAGTGCCGCGTTAACAAACCAAGACACGTGTCTGGAGGGATTTGAAGACACTAGCGGTACCGTTAAGGATCAAATGGTTGGTAACTTAAAGGATTTGTCGGAACTCGTGAGTAATTCTCTCGCGATATTTTCAGCTAGTGGAGATAATGATTTTACTGGTGTGCCGATACAGAACAAGAGAAGATTAATGGGAATGAGCGATATCTCGCGAGAATTTCCCGAGTGGCTTCAGAAACGAGATAGGAGATTATTGAGTTTACCGGTATCGGAGATTCAAGCCGATATTATCGTTTCGAAGAGTGGTGGTGACGGTGCGGTGAAGACAATTACCGAAGCGATTAAGAAAGCACCGGAACATAGTCACCGTAGATTCATAATCTACGTGAGGGCAGGAAGGTACGAAGAGAATAATTTAAAGGTTGGGAAGAAGAAAACTAATATTATGTTTATAGGAGATGGGAAGGGCAAAACTGTCATTACAGGGAAAAGAAGTGTTGGAGATGGCATGACCACTTTCCACACAGCTTCCTTTGCTGCTAGTGGTCCTGGGTTCATGGCACGTGACATCACATTCGAGAACTACGCTGGACCGGAGAAGCACCAAGCGGTGGCACTCCGTGTCGGAGCAGATCACGCGGTGGTGTACCGGTGCAACATTGTTGGGTACCAAGACTCATGTTACGTACATTCCAACCGTCAATTTTTCCGTGAATGCAACATTTATGGAACGGTAGATTTTATATTTGGAAATGCTGCGGTAGTTTTTCAAAAATGCAACATTTATGCACGTAAGCCCATGGCCCAACAAAAGAACACTATCACAGCCCAAAATAGAAAAGACCCAAATCAAAATACGGGTATATCCATTCATGATTGTCGGATCCTACCTGCCCCGGATCTAGCCTCATCAAAGGGAAGCATTGAAACATATTTGGGTCGTCCATGGAAAATGTATTCTAGGACCATTTATATGTTGTCCTACATGGGTGATCATGTGCATCCACATGGATGGTTGGAATGGAATGGTGAATTTGCTTTAAAAACTTTGTATTATGGTGAGTACATGAATTTTGGGCCGGGCGCGGCTATCGGACAACGGGTCAAATGGCCTGGGTACCGAGTCATTACTTCTACTGTGGAGGCCAATAGATACACTGTGGCCCAATTTATATCCGGCTCGTCGTGGTTACCGTCCACCGGAGTGGCATTTTTGGCCGGTTTACAGACATGA 1824 0.4616 MDFDRLGPLDPGGSSRRSTAPLTNSTVSNSQKSNKKLMMLSILAAVLIIASAISAALITVVRSRASSNNSNLLRAKPTQAISRTCSKTRYPSLCINSLLDFPGSTSASEQELVHISFNMTHRHIGKALFASSGLSYTLANPRVRAAYEDCLELMDESMDAIKLSMNSLTMSSTLSRDDGETGRFSNVAGSNEDVMTWLSAALTNQDTCLEGFEDTSGTVKDQMVGNLKDLSELVSNSLAIFSASGDNDFTGVPIQNKRRLMGMSDISREFPEWLQKRDRRLLSLPVSEIQADIIVSKSGGDGAVKTITEAIKKAPEHSHRRFIIYVRAGRYEENNLKVGKKKTNIMFIGDGKGKTVITGKRSVGDGMTTFHTASFAASGPGFMARDITFENYAGPEKHQAVALRVGADHAVVYRCNIVGYQDSCYVHSNRQFFRECNIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISIHDCRILPAPDLASSKGSIETYLGRPWKMYSRTIYMLSYMGDHVHPHGWLEWNGEFALKTLYYGEYMNFGPGAAIGQRVKWPGYRVITSTVEANRYTVAQFISGSSWLPSTGVAFLAGLQT* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5310 607 PANTHER PECTINESTERASE 27 605 - -
Mal1g5310 607 Gene3D Invertase/pectin methylesterase inhibitor family protein 78 243 IPR035513 -
Mal1g5310 607 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 241 IPR006501 GO:0004857
Mal1g5310 607 SUPERFAMILY Pectin lyase-like 289 604 IPR011050 -
Mal1g5310 607 Pfam Plant invertase/pectin methylesterase inhibitor 80 240 IPR006501 GO:0004857
Mal1g5310 607 Gene3D - 286 605 IPR012334 -
Mal1g5310 607 ProSitePatterns Pectinesterase signature 2. 438 447 IPR033131 -
Mal1g5310 607 PANTHER PECTINESTERASE 27 605 - -
Mal1g5310 607 Pfam Pectinesterase 292 590 IPR000070 GO:0030599|GO:0042545
Mal1g5310 607 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 242 IPR035513 -
Mal1g5310 607 CDD PMEI-like_3 85 243 - -
Mal1g5310 607 SMART PMEI_2 76 240 IPR006501 GO:0004857
Mal1g5310 607 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5310 Mal-Chr1 126569083 126572358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5310 1 605 Carbohydrate Esterase AT5G53370 62.336 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5310 - - gmx:106796002 931.398