Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5304 ATGGGAAGAAAAGGAGGTAGCTGGTTCTCCTCTGTCAAGAAAGTTTTCAAGTCATCTTCATCTTCTAAAGACACGTTAGTACCCGTCTCCACGCCCGCGCAGCCGGAGAAAAAGAAGGAAAACAAAGAGAAATCGGAGCATGAAGTGGCAGAGGAGGTGTCATTTGAGCATTTTCCTGCAGAGAGTTCACCTGATGATGTGACGAACGAGGGGAGTACAACATCGACGCCTGTGAGAGAAGATAGAAACCATGCCATTGCAGTTGCAGAAGCTACTGCAGCAGCTGCTGAAGCTGCTGTGGTAGCTGCTCAAGCAGCTGCTAGAGTTGTGAGATTGGCTGGTTATGGACGCCATAACAAGGAGGAAAGAGCAGCAACATTCATTCAATCACACTATAGAGGATACCTAGCTCGACGTGCATTACGCGCATTGAAAGGTTTAGTGAGGTTGCAAGCATTAGTAAGAGGACACAATGTTCGCAAGCAAGCTCAGATGACAATGCGGTGTATGCAAGCGTTGGTGCGGGTGCAGGCACGAGTGAGAGCACGACGAGTTCAATTGAGTCACGAGAATCTCGAGAAAGCAATGGAGGAAGAGGAAGAAGAATTTGTGAGGCAACAAGAGAAAATTAATAAGCCTATGAGTCCCATGAGGAGGTCAGCAGGCATTAATAATAATAATGGTTGGGATAACAAACCTCAAAGTGCAAAAAAAGCTAAAGAAAATGATTTGAGAAAACATGAAGCTGCAATGAAGAGGGAGAGAGCTCTTGCATATGCTTTCAACTATCAGCAGGTCACTTGGTTGCATGATTCGATCTTCAATCTTGTGGTTCTCAGTTCGAGACTTAGCACTATATGGCTGAGAAACGGAGGAAAATAA 882 0.4535 MGRKGGSWFSSVKKVFKSSSSSKDTLVPVSTPAQPEKKKENKEKSEHEVAEEVSFEHFPAESSPDDVTNEGSTTSTPVREDRNHAIAVAEATAAAAEAAVVAAQAAARVVRLAGYGRHNKEERAATFIQSHYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRVQLSHENLEKAMEEEEEEFVRQQEKINKPMSPMRRSAGINNNNGWDNKPQSAKKAKENDLRKHEAAMKRERALAYAFNYQQVTWLHDSIFNLVVLSSRLSTIWLRNGGK* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5304 293 PANTHER IQ-DOMAIN 5-RELATED 1 267 - -
Mal1g5304 293 MobiDBLite consensus disorder prediction 215 242 - -
Mal1g5304 293 Gene3D - 118 170 - -
Mal1g5304 293 Coils Coil 182 209 - -
Mal1g5304 293 MobiDBLite consensus disorder prediction 16 82 - -
Mal1g5304 293 MobiDBLite consensus disorder prediction 65 80 - -
Mal1g5304 293 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Mal1g5304 293 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Mal1g5304 293 MobiDBLite consensus disorder prediction 35 59 - -
Mal1g5304 293 SMART iq_5 120 142 IPR000048 GO:0005515
Mal1g5304 293 SMART iq_5 143 164 IPR000048 GO:0005515
Mal1g5304 293 Coils Coil 237 257 - -
Mal1g5304 293 MobiDBLite consensus disorder prediction 218 233 - -
Mal1g5304 293 PANTHER IQ-DOMAIN 21 1 267 - -
Mal1g5304 293 Pfam IQ calmodulin-binding motif 148 163 IPR000048 GO:0005515
Mal1g5304 293 Pfam IQ calmodulin-binding motif 122 142 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5304 Mal-Chr1 126373894 126381877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5304 1 264 IQD Protein Family AT3G49260 55.282 1.79e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5304 - - gmx:100798026 270.396