Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5291 ATGGCTTCATTGAGTCGAAGAAGAACACAAGTTCCAATTCCAGCTCCCAAAAATAAATTCAACGACGACGACATTGTTTGCCTAAACTGCAACTCCGGAAAATCCCCAACCAAGTTGCTTCTTTGCGACAATTGCGACAGAGGCTACCATCTCTTCTGCCTCACACCTCCTCACACCTATCCTCCCTTCCCTTTTCCTTTAGTACAAACCAAAATTATTGATTTCTTCAAAATTCAACAATCCACTGATGCATCTCAGATTCCGAATCACGATGTAAGGAAGGGAAAATGGGGTAGTCGTTTGGTCATTTCGAAAAAGAAAAGGAAGCTGTTGCCGTTTGTGCCGAGTGATGATTCTAAGAGGAGATTAGAACAGATGGCTTCGTTGGCAACGGCGTTGACTGCAACTAAAACGGAGTTCAGTAATGAGCTGGCTCCAAGGGGTGCTAATTCTCCTGCACTTGAACGTGGAGGAATGCAGGTCTTATCAAAAGAAGACACCGAGACTCTAAACTTGTGCAGAAGCATGATGGAAAGAGGAGAATGTCCACCCCTCATGGTTGTTCATGATCCTCTGGAAGGGTTCACTGTAGAAGCTGATAAACCCATAAAACCTTTGACAATAATAACAGAATATGTTGGAGATGTAGACTTTTTAAAGAATCGGGAATATGACGATGGAGATAGCATTATGACACTTCTTTCTGCTTCTAATCCTTCACAATCGCTGGTCATCTGCCCAGATAAACGTAGCAACATAGCACGTTTCATTAATGGGATCAACAATCACACCCATGAAGGAAAAAAGAAGCAGAACTTGAAATCTATGAGATTTGATGTTGATGGTGAATGTCGGGTTCTTTTAATTGCTAATAGATATATAGCAAGAGGGGAAAGGTTATATTATGACTACAATGGATACGAACATAAATATCCAACTGAACATTTTGTCTAA 954 0.4109 MASLSRRRTQVPIPAPKNKFNDDDIVCLNCNSGKSPTKLLLCDNCDRGYHLFCLTPPHTYPPFPFPLVQTKIIDFFKIQQSTDASQIPNHDVRKGKWGSRLVISKKKRKLLPFVPSDDSKRRLEQMASLATALTATKTEFSNELAPRGANSPALERGGMQVLSKEDTETLNLCRSMMERGECPPLMVVHDPLEGFTVEADKPIKPLTIITEYVGDVDFLKNREYDDGDSIMTLLSASNPSQSLVICPDKRSNIARFINGINNHTHEGKKKQNLKSMRFDVDGECRVLLIANRYIARGERLYYDYNGYEHKYPTEHFV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5291 317 Pfam PHD-finger 27 59 IPR019787 -
Mal1g5291 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 96 IPR013083 -
Mal1g5291 317 Gene3D SET domain 97 317 IPR046341 -
Mal1g5291 317 SUPERFAMILY SET domain 175 305 IPR046341 -
Mal1g5291 317 CDD SET_ATXR5_6-like 180 317 - -
Mal1g5291 317 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR6 5 314 - -
Mal1g5291 317 PANTHER HISTONE ACETYLTRANSFERASE 5 314 - -
Mal1g5291 317 SUPERFAMILY FYVE/PHD zinc finger 20 60 IPR011011 -
Mal1g5291 317 ProSiteProfiles SET domain profile. 168 305 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5291 Mal-Chr1 126135072 126137960 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal1g5291 PHD 5.5e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5291 K24406 - gmx:100775247 445.662